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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • peroxisome 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:golgi, mitochondrion, peroxisome, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G547100.1 Wheat mitochondrion 74.83 75.17
TraesCS2D01G520200.1 Wheat mitochondrion 74.15 74.49
TraesCS2A01G518800.1 Wheat plastid 73.92 73.76
Os04t0644200-00 Rice mitochondrion 78.23 63.07
VIT_11s0118g00530.t01 Wine grape cytosol 18.82 43.01
PGSC0003DMT400078858 Potato nucleus 35.37 34.67
Solyc07g007360.1.1 Tomato cytosol, mitochondrion, nucleus 34.69 34.3
AT1G72275.1 Thale cress cytosol 31.07 32.31
CDX93109 Canola plastid 16.33 30.25
Bra013151.1-P Field mustard plastid 15.87 29.66
Zm00001d006850_P001 Maize cytosol 11.34 24.15
Zm00001d045208_P001 Maize endoplasmic reticulum, vacuole 20.18 23.3
Zm00001d038377_P002 Maize nucleus 21.54 21.25
Zm00001d010356_P001 Maize nucleus 22.9 21.17
Zm00001d009746_P001 Maize cytosol, nucleus, plastid 21.54 21.06
Zm00001d048620_P001 Maize mitochondrion 18.59 21.03
Zm00001d010344_P001 Maize cytosol 22.0 20.42
Zm00001d039524_P001 Maize cytosol 21.09 19.7
Zm00001d018916_P001 Maize cytosol 17.46 19.01
Zm00001d005463_P001 Maize cytosol 6.8 18.18
Zm00001d044300_P001 Maize cytosol 22.9 17.78
Zm00001d010347_P001 Maize nucleus, plastid 11.79 16.83
Protein Annotations
EnsemblPlants:Zm00001d026435_P001EnsemblPlants:Zm00001d026435_T001EnsemblPlantsGene:Zm00001d026435InterPro:HARBI1_domPANTHER:PTHR22930PANTHER:PTHR22930:SF87
PFAM:PF13359ProteinID:AQK46591.1SEG:segUniParc:UPI0002210FA2UniProt:K7U7B3MapMan:35.1
Description
PIF / Ping-Pong family of plant transposases
Coordinates
chr10:-:145793619..145794944
Molecular Weight (calculated)
47480.4 Da
IEP (calculated)
8.224
GRAVY (calculated)
0.115
Length
441 amino acids
Sequence
(BLAST)
001: MVASGRKRSR GAAVPAPSSP SRPPSPQSPP QLTSLLALLA SSVTLALRFA SDRDLLLRPS QTLALDPLLL SAARAVSRLL AQLPLHLQTL TLTSLSLSPP
101: TPSPQLPSSW FLRLLSCPSL PDSAWRDAFR MSKPAFFQLL HALALPAPAA SSSSALALPP DHKLGAALFR LAHAAPARAV ARRFGLPSPA VAARAFYEVC
201: RAIAERLAVL LDLVAPDRIA RAVPGFCALS LPNCCGALGY ARFGEAATAQ ALVDADGRFL DVSVGWDPEM APAEILPRTK LYTSQSLVLA NAPQGELIGG
301: SVPRYFLGPA CCPLLPWLVT PYRHVVDAIA ADDDLSKESI FNHVHAHGQQ VVKNAFGHVR ARWRLLEECW KGECQEALPY VVVAGCLLHN FLLQCGEPAT
401: EVIQRNADDD RFVDFEGDKD REGERIRDVL AAHLSLVSRN Q
Best Arabidopsis Sequence Match ( AT1G72275.2 )
(BLAST)
001: MVAGKRKSDR NPTNVSDKLG LKDPLLRRLS SAAAVTNSFL QANDLFLSPS QTLRLESLIS SLPISPSPSS SSSAITTTTW FNRFLTSATE DEDDPRWCLY
101: FRMSKSTFFS LYSILSHSSL PSFAATIFRL AHGASYECLV HRFGFDSTSQ ASRSFFTVCK LINEKLSQQL DDPKPDFSPN LLPNCYGVVG FGRFEVKGKL
201: LGAKGSILVQ ALVDSNGRFV DISAGWPSTM KPEAIFRQTK LFSIAEEVLS GAPTKLGNGV LVPRYILGDS CLPLLPWLVT PYDLTSDEES FREEFNNVVH
301: TGLHSVEIAF AKVRARWRIL DKKWKPETIE FMPFVITTGC LLHNFLVNSG DDDDSVEECV NGCEAGDNGE MRKDDDKEEE TRSFEGEAYR ESKRIRDAIA
401: ENLSRVSSLR
Arabidopsis Description
LOW protein: nuclease-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AMV0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.