Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010356_P001 | Maize | nucleus | 81.26 | 80.92 |
| Zm00001d010347_P001 | Maize | nucleus, plastid | 34.53 | 53.07 |
| TraesCS1B01G141100.1 | Wheat | cytosol, extracellular, peroxisome | 52.21 | 52.32 |
| TraesCS1D01G122700.1 | Wheat | cytosol, extracellular, peroxisome | 52.63 | 52.3 |
| TraesCS1A01G121900.1 | Wheat | cytosol, extracellular, plasma membrane | 52.21 | 51.88 |
| Solyc08g062680.1.1 | Tomato | cytosol | 15.58 | 47.13 |
| Zm00001d039524_P001 | Maize | cytosol | 46.74 | 47.03 |
| Os05t0184901-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 46.11 | 46.79 |
| Os05t0183900-00 | Rice | cytosol | 45.89 | 45.13 |
| GSMUA_Achr5P22180_001 | Banana | nucleus | 30.95 | 44.55 |
| GSMUA_Achr6P04860_001 | Banana | cytosol, nucleus, plastid | 31.58 | 44.25 |
| GSMUA_Achr6P00850_001 | Banana | nucleus | 35.16 | 43.72 |
| Zm00001d009746_P001 | Maize | cytosol, nucleus, plastid | 41.05 | 43.24 |
| PGSC0003DMT400000875 | Potato | cytosol | 38.32 | 40.81 |
| VIT_11s0016g01810.t01 | Wine grape | nucleus | 41.05 | 38.31 |
| Solyc12g009000.1.1 | Tomato | cytosol | 38.74 | 38.02 |
| Solyc07g040960.1.1 | Tomato | cytosol | 39.79 | 37.88 |
| PGSC0003DMT400027828 | Potato | cytosol | 40.21 | 37.75 |
| Zm00001d044300_P001 | Maize | cytosol | 43.79 | 36.62 |
| Os05t0184500-00 | Rice | cytosol | 26.74 | 35.88 |
| AT4G29780.1 | Thale cress | cytosol | 38.32 | 33.7 |
| Zm00001d006850_P001 | Maize | cytosol | 9.89 | 22.71 |
| Zm00001d005463_P001 | Maize | cytosol | 7.79 | 22.42 |
| Zm00001d026435_P001 | Maize | plastid | 20.42 | 22.0 |
| Zm00001d038377_P002 | Maize | nucleus | 19.79 | 21.03 |
| Zm00001d018916_P001 | Maize | cytosol | 17.89 | 20.99 |
| Zm00001d048620_P001 | Maize | mitochondrion | 17.05 | 20.77 |
| Zm00001d045208_P001 | Maize | endoplasmic reticulum, vacuole | 16.63 | 20.68 |
Protein Annotations
| EnsemblPlants:Zm00001d010344_P001 | EnsemblPlants:Zm00001d010344_T001 | EnsemblPlantsGene:Zm00001d010344 | EntrezGene:103637174 | InterPro:HARBI1_dom | PANTHER:PTHR22930 |
| PANTHER:PTHR22930:SF64 | PFAM:PF13359 | ProteinID:AQK93922.1 | SEG:seg | UniParc:UPI0002220A2B | UniProt:K7V3R3 |
| MapMan:35.2 | : | : | : | : | : |
Description
PIF / Ping-Pong family of plant transposases
Coordinates
chr8:+:110668957..110670384
Molecular Weight (calculated)
50433.4 Da
IEP (calculated)
6.981
GRAVY (calculated)
-0.157
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MHEHDNVGSG SQPNAPFAAD ADDANFSLFF DAHEHDHLGA VDAMTMMPLP PQVFADLPVN PIPSSAVQGS LVPAASEGGT TTGNTSRSGK RRRPPTRSSQ
101: SNDAPGESSD GQAQDQAAAT AVASRRVWVW KRSTEWWDHL DGPSCPDAEF RRAFRMSRAT FGALCDALGG AVAKMDTALR TAIPVRQRVA VCLWRLATAE
201: PLREVSRRFG LGISTSHSIV LQVYHALAAV LRPTVIYWPG PDSAATVAAR FEAAFGLAGI VGALYTTRVP IVAPKANVAA YYDCGLTERN QKASYSVAVQ
301: AVADADGVFT NVWIGPGSLS DAAILGRSAL SGLLAGGHGQ GQRLVGGTSY PPMDWMLVPY AHQNLTWTEH ASNERVAAAR GVARGAVRRL KARWRCLQRR
401: SEVKMQDLHS MVAACCVLHN VCERAGEELD PELMQYDLDD VIAHDAAAAA PSAPPAQAAG DSIAHGLLHG GHASN
101: SNDAPGESSD GQAQDQAAAT AVASRRVWVW KRSTEWWDHL DGPSCPDAEF RRAFRMSRAT FGALCDALGG AVAKMDTALR TAIPVRQRVA VCLWRLATAE
201: PLREVSRRFG LGISTSHSIV LQVYHALAAV LRPTVIYWPG PDSAATVAAR FEAAFGLAGI VGALYTTRVP IVAPKANVAA YYDCGLTERN QKASYSVAVQ
301: AVADADGVFT NVWIGPGSLS DAAILGRSAL SGLLAGGHGQ GQRLVGGTSY PPMDWMLVPY AHQNLTWTEH ASNERVAAAR GVARGAVRRL KARWRCLQRR
401: SEVKMQDLHS MVAACCVLHN VCERAGEELD PELMQYDLDD VIAHDAAAAA PSAPPAQAAG DSIAHGLLHG GHASN
001: MKAAVFRNED GDEEEEEEEE EEVCNVFDGG EVESKRNNET KNLKGFFTSL LLMEEHEKQD QEARNAASRR EMSDFQSNYR KRARTMSDYY SDLNDYYADA
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL
Arabidopsis Description
AT5g12010/F14F18_180 [Source:UniProtKB/TrEMBL;Acc:Q9LYH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.