Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0184901-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 73.29 | 75.64 |
| Os05t0184500-00 | Rice | cytosol | 39.96 | 54.52 |
| TraesCS1B01G141100.1 | Wheat | cytosol, extracellular, peroxisome | 53.42 | 54.43 |
| TraesCS1D01G122700.1 | Wheat | cytosol, extracellular, peroxisome | 53.42 | 53.97 |
| TraesCS1A01G121900.1 | Wheat | cytosol, extracellular, plasma membrane | 52.8 | 53.35 |
| Os05t0593000-01 | Rice | cytosol, nucleus, plastid | 41.41 | 47.28 |
| Zm00001d010344_P001 | Maize | cytosol | 45.13 | 45.89 |
| GSMUA_Achr5P22180_001 | Banana | nucleus | 31.26 | 45.76 |
| Os01t0186900-02 | Rice | cytosol | 42.65 | 45.47 |
| Solyc08g062680.1.1 | Tomato | cytosol | 14.49 | 44.59 |
| Zm00001d010356_P001 | Maize | nucleus | 43.69 | 44.23 |
| GSMUA_Achr6P04860_001 | Banana | cytosol, nucleus, plastid | 30.23 | 43.07 |
| GSMUA_Achr6P00850_001 | Banana | nucleus | 33.54 | 42.41 |
| PGSC0003DMT400000875 | Potato | cytosol | 37.68 | 40.81 |
| Solyc12g009000.1.1 | Tomato | cytosol | 38.92 | 38.84 |
| PGSC0003DMT400027828 | Potato | cytosol | 39.54 | 37.75 |
| Solyc07g040960.1.1 | Tomato | cytosol | 38.92 | 37.68 |
| Os01t0582600-01 | Rice | nucleus | 41.2 | 36.12 |
| VIT_11s0016g01810.t01 | Wine grape | nucleus | 37.89 | 35.95 |
| AT4G29780.1 | Thale cress | cytosol | 34.99 | 31.3 |
| Zm00001d010347_P001 | Maize | nucleus, plastid | 19.25 | 30.1 |
| Os01t0838900-01 | Rice | cytosol, mitochondrion | 21.12 | 25.76 |
| Os11t0702700-01 | Rice | mitochondrion | 18.84 | 23.27 |
| Os07t0175100-01 | Rice | nucleus | 20.08 | 22.25 |
| Os06t0164500-00 | Rice | mitochondrion | 17.39 | 19.27 |
| Os04t0644200-00 | Rice | mitochondrion | 19.25 | 17.0 |
Protein Annotations
| EnsemblPlants:Os05t0183900-00 | EnsemblPlantsGene:Os05g0183900 | EntrezGene:107275333 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF64 |
| PFAM:PF13359 | ProteinID:AAU44321.1 | ProteinID:BAS92590.1 | RefSeq:XP_015638526.1 | SEG:seg | UniParc:UPI000043F4C2 |
| UniProt:Q65WX7 | MapMan:35.1 | : | : | : | : |
Description
Similar to transposon protein CACTA, En/Spm sub-class. (Os05t0183900-00)
Coordinates
chr5:+:5113979..5115430
Molecular Weight (calculated)
52373.1 Da
IEP (calculated)
6.926
GRAVY (calculated)
-0.204
Length
483 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTFLELEPF STPLFEIPDD ADFEYTSMLA ADDFSLMDGD FLADQPPAPA EVVAGGGDAS GKRSFHANDG EAMCVVSRSS KRRKKAPTNS TSPSNRDGSG
101: GGGGGEGNEP TAERRGSRRV WVRERSTEWW DRMRDPAACP EADFRRAFRM PRAVFDKLCD DLAAAVAKVD TTLRSAIPVP QRVAVCLWRL ATGDPLREVS
201: RRFGLGISTC HNIIVQVCAA ITAVLLTRVV RWPDSHAAAA SRFQALSWIP GVVGAVHTEH FRIVAPREHA GKYYDHRLTG RNNKATYSVA MQAVVDADGA
301: FTDVCIGHPG SLSDAAILAK SALYARCEAG LLLGHDKLGW QQPLWLVGGA SYPLTSWMLV PYTQPNLTWA QDRLNARVAD ARAAAVGAFR RLRARWQCLR
401: RAEVKLPELA NMLGACCVLH NLCERSGHGL DADLLDLLDD ELVDDGVVAG GGNTVRSPAA EQVRDRIAHG LLDQYVGNAS LSG
101: GGGGGEGNEP TAERRGSRRV WVRERSTEWW DRMRDPAACP EADFRRAFRM PRAVFDKLCD DLAAAVAKVD TTLRSAIPVP QRVAVCLWRL ATGDPLREVS
201: RRFGLGISTC HNIIVQVCAA ITAVLLTRVV RWPDSHAAAA SRFQALSWIP GVVGAVHTEH FRIVAPREHA GKYYDHRLTG RNNKATYSVA MQAVVDADGA
301: FTDVCIGHPG SLSDAAILAK SALYARCEAG LLLGHDKLGW QQPLWLVGGA SYPLTSWMLV PYTQPNLTWA QDRLNARVAD ARAAAVGAFR RLRARWQCLR
401: RAEVKLPELA NMLGACCVLH NLCERSGHGL DADLLDLLDD ELVDDGVVAG GGNTVRSPAA EQVRDRIAHG LLDQYVGNAS LSG
001: MEISSFPFPY LQDDECSHFL GLFQDMDSSP STFGLEGFNS NDNNTNQKKR PRKDDEGGGG GGGGTEVLGA VNGNNKAAFG DILATLLLLD EEAKQQQEQW
101: DFEFIKEKSL LEANHKKKVK TMDGYYNQMQ DHYSAAGETD GSRSKRARKT AVAAVVSAVA SGADTTGLAA PVPTADIASG SGSGPSHRRL WVKERTTDWW
201: DRVSRPDFPE DEFRREFRMS KSTFNLICEE LDTTVTKKNT MLRDAIPAPK RVGVCVWRLA TGAPLRHVSE RFGLGISTCH KLVIEVCRAI YDVLMPKYLL
301: WPSDSEINST KAKFESVHKI PNVVGSIYTT HIPIIAPKVH VAAYFNKRHT ERNQKTSYSI TVQGVVNADG IFTDVCIGNP GSLTDDQILE KSSLSRQRAA
401: RGMLRDSWIV GNSGFPLTDY LLVPYTRQNL TWTQHAFNES IGEIQGIATA AFERLKGRWA CLQKRTEVKL QDLPYVLGAC CVLHNICEMR KEEMLPELKF
501: EVFDDVAVPE NNIRSASAVN TRDHISHNLL HRGLAGTRTL
101: DFEFIKEKSL LEANHKKKVK TMDGYYNQMQ DHYSAAGETD GSRSKRARKT AVAAVVSAVA SGADTTGLAA PVPTADIASG SGSGPSHRRL WVKERTTDWW
201: DRVSRPDFPE DEFRREFRMS KSTFNLICEE LDTTVTKKNT MLRDAIPAPK RVGVCVWRLA TGAPLRHVSE RFGLGISTCH KLVIEVCRAI YDVLMPKYLL
301: WPSDSEINST KAKFESVHKI PNVVGSIYTT HIPIIAPKVH VAAYFNKRHT ERNQKTSYSI TVQGVVNADG IFTDVCIGNP GSLTDDQILE KSSLSRQRAA
401: RGMLRDSWIV GNSGFPLTDY LLVPYTRQNL TWTQHAFNES IGEIQGIATA AFERLKGRWA CLQKRTEVKL QDLPYVLGAC CVLHNICEMR KEEMLPELKF
501: EVFDDVAVPE NNIRSASAVN TRDHISHNLL HRGLAGTRTL
Arabidopsis Description
Nuclease [Source:UniProtKB/TrEMBL;Acc:Q84J48]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.