Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- plastid 1
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G350500.1 | Wheat | mitochondrion | 81.31 | 81.31 |
| TraesCS3A01G356500.1 | Wheat | mitochondrion | 79.55 | 79.55 |
| TraesCS3B01G389300.1 | Wheat | mitochondrion | 76.77 | 76.96 |
| Zm00001d005463_P001 | Maize | cytosol | 29.04 | 69.7 |
| Zm00001d038377_P002 | Maize | nucleus | 60.61 | 53.69 |
| VIT_06s0004g04160.t01 | Wine grape | nucleus | 51.26 | 52.86 |
| Os11t0702700-01 | Rice | mitochondrion | 51.26 | 51.92 |
| Solyc11g073090.1.1 | Tomato | cytosol | 42.17 | 50.76 |
| AT3G55350.1 | Thale cress | nucleus | 47.73 | 46.55 |
| Bra007153.1-P | Field mustard | nucleus | 47.47 | 46.42 |
| Solyc05g054670.2.1 | Tomato | cytosol | 44.7 | 44.81 |
| VIT_13s0019g00460.t01 | Wine grape | plastid | 39.39 | 40.41 |
| Os07t0175100-01 | Rice | nucleus | 38.64 | 35.09 |
| Os05t0593000-01 | Rice | cytosol, nucleus, plastid | 24.49 | 22.93 |
| Os01t0186900-02 | Rice | cytosol | 25.51 | 22.3 |
| Os05t0184901-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 25.76 | 21.79 |
| Os05t0183900-00 | Rice | cytosol | 25.76 | 21.12 |
| Os05t0184500-00 | Rice | cytosol | 16.16 | 18.08 |
| Os06t0164500-00 | Rice | mitochondrion | 19.7 | 17.89 |
| Os01t0582600-01 | Rice | nucleus | 24.75 | 17.79 |
| Os04t0644200-00 | Rice | mitochondrion | 23.48 | 17.0 |
Protein Annotations
| EMBL:AK073490 | EnsemblPlants:Os01t0838900-01 | EnsemblPlantsGene:Os01g0838900 | EntrezGene:4327379 | InterPro:HARBI1_dom | PANTHER:PTHR22930 |
| PANTHER:PTHR22930:SF111 | PFAM:PF13359 | ProteinID:BAB67881.1 | ProteinID:BAF06663.1 | ProteinID:BAS75138.1 | ProteinID:EEE55644.1 |
| RefSeq:XP_015622410.1 | SEG:seg | UniParc:UPI00000A9467 | UniProt:Q943M0 | MapMan:35.1 | : |
Description
Trp repressor/replication initiator domain containing protein. (Os01t0838900-01)
Coordinates
chr1:-:35984258..35987592
Molecular Weight (calculated)
44071.9 Da
IEP (calculated)
8.683
GRAVY (calculated)
-0.338
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPLRGAKRR KRQPEKALPA AGQAMPAPAP GGDWWDGFAR RLAAGQFSKD CQNFESVFKM SRKTFDYLCS LISGDFTRKT QSFRNFRFGD KAILGVEDQV
101: GVALLRLTTG ESLLSIGNRF GMNHSAISNI TWKFIEALEE RAANHLKWPT PEEMATVKSK FEKIQGLPNC CGAIDTTHIL MCSSAQPNSN VWLDGENRNS
201: MVLQAIVDAD MRFRDVVSGW PGSLNDSCIL RTSGFYRLCE KGARLDGQTE LPGEPAGSVV RDYILGDASY PLLPWLMTPY REKDLSPAKA DFNKRHAATI
301: MVVQGALAKL KERWQVLKGE LWRPDKHRLP RIIYVCCLLT NIMIDLEDAA RGGMPPSHNH DDGYRQQFSD VADVGAAALR DQLCQYVSRI GSSLPA
101: GVALLRLTTG ESLLSIGNRF GMNHSAISNI TWKFIEALEE RAANHLKWPT PEEMATVKSK FEKIQGLPNC CGAIDTTHIL MCSSAQPNSN VWLDGENRNS
201: MVLQAIVDAD MRFRDVVSGW PGSLNDSCIL RTSGFYRLCE KGARLDGQTE LPGEPAGSVV RDYILGDASY PLLPWLMTPY REKDLSPAKA DFNKRHAATI
301: MVVQGALAKL KERWQVLKGE LWRPDKHRLP RIIYVCCLLT NIMIDLEDAA RGGMPPSHNH DDGYRQQFSD VADVGAAALR DQLCQYVSRI GSSLPA
001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
Arabidopsis Description
Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.