Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 6
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026435_P001 | Maize | plastid | 63.07 | 78.23 |
| TraesCS2B01G547100.1 | Wheat | mitochondrion | 62.52 | 77.9 |
| TraesCS2D01G520200.1 | Wheat | mitochondrion | 61.61 | 76.77 |
| TraesCS2A01G518800.1 | Wheat | plastid | 61.61 | 76.24 |
| VIT_11s0118g00530.t01 | Wine grape | cytosol | 16.09 | 45.6 |
| PGSC0003DMT400078858 | Potato | nucleus | 29.8 | 36.22 |
| Solyc07g007360.1.1 | Tomato | cytosol, mitochondrion, nucleus | 28.7 | 35.2 |
| AT1G72275.1 | Thale cress | cytosol | 24.68 | 31.84 |
| CDX93109 | Canola | plastid | 12.98 | 29.83 |
| Bra013151.1-P | Field mustard | plastid | 12.43 | 28.81 |
| Os01t0838900-01 | Rice | cytosol, mitochondrion | 17.0 | 23.48 |
| Os06t0164500-00 | Rice | mitochondrion | 17.55 | 22.02 |
| Os05t0593000-01 | Rice | cytosol, nucleus, plastid | 16.45 | 21.28 |
| Os07t0175100-01 | Rice | nucleus | 16.82 | 21.1 |
| Os05t0184901-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 17.37 | 20.3 |
| Os11t0702700-01 | Rice | mitochondrion | 14.08 | 19.69 |
| Os05t0183900-00 | Rice | cytosol | 17.0 | 19.25 |
| Os01t0186900-02 | Rice | cytosol | 15.9 | 19.21 |
| Os01t0582600-01 | Rice | nucleus | 17.55 | 17.42 |
| Os05t0184500-00 | Rice | cytosol | 10.79 | 16.67 |
Protein Annotations
| EnsemblPlants:Os04t0644200-00 | EnsemblPlantsGene:Os04g0644200 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF87 | PFAM:PF13359 |
| ProteinID:BAS91293.1 | SEG:seg | UniParc:UPI000393AEA5 | UniProt:A0A0P0WFT7 | MapMan:35.1 | : |
Description
Similar to H0306F03.14 protein. (Os04t0644200-00)
Coordinates
chr4:-:32777808..32779467
Molecular Weight (calculated)
59162.7 Da
IEP (calculated)
9.781
GRAVY (calculated)
-0.023
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKKKIRLEL GTPTRALTAI YSDVTTARRS GWQVRCSCNN AVLPLSRGGR RVGPTTDRRR EKAHVVIKPE AQRLAHLDPP SHTHAHFSHS LSLSLSLQSP
101: SPPAKTAARA PRMVAAGRKR RSRSALAVVP ATPSPPSPPQ LTSLLALLAS SVSLALRFAS DRDLLLHPSQ TLELDPLVLA AARGVSRLLA MLPLHLQTLT
201: LTSMSLSPPA PSPPLPSSWF LRLLSESHSL PDSAWRDAFR MSRPAFFQLL HSLALSDPAA ASSSSLALPP DHKLGAALFR LAHAAPARAV ARRFGLPSPA
301: VAARAFYEVC RTIADRLAIL LDLGAPDRIA RAVPGFCALS LPNCCGALGY ARIGDAVIAQ ALVDAEGRFL DVSVGWDTAM APAEILPRTK LYSSQSLVLA
401: NAPHGELIGG SVPRYFLGPA CCPMLPWLVT PYNDMDAKNG MSKESIFNNV HSHGMRLVRN AFGHVRSRWR LLDECWKGEC QEALPYVVVA GCLLHNFLIK
501: CGEPDPEEIQ EGAAAELFSD FEGEKDKEGE RIRDVLAVHL SLVSRNQ
101: SPPAKTAARA PRMVAAGRKR RSRSALAVVP ATPSPPSPPQ LTSLLALLAS SVSLALRFAS DRDLLLHPSQ TLELDPLVLA AARGVSRLLA MLPLHLQTLT
201: LTSMSLSPPA PSPPLPSSWF LRLLSESHSL PDSAWRDAFR MSRPAFFQLL HSLALSDPAA ASSSSLALPP DHKLGAALFR LAHAAPARAV ARRFGLPSPA
301: VAARAFYEVC RTIADRLAIL LDLGAPDRIA RAVPGFCALS LPNCCGALGY ARIGDAVIAQ ALVDAEGRFL DVSVGWDTAM APAEILPRTK LYSSQSLVLA
401: NAPHGELIGG SVPRYFLGPA CCPMLPWLVT PYNDMDAKNG MSKESIFNNV HSHGMRLVRN AFGHVRSRWR LLDECWKGEC QEALPYVVVA GCLLHNFLIK
501: CGEPDPEEIQ EGAAAELFSD FEGEKDKEGE RIRDVLAVHL SLVSRNQ
001: MVAGKRKSDR NPTNVSDKLG LKDPLLRRLS SAAAVTNSFL QANDLFLSPS QTLRLESLIS SLPISPSPSS SSSAITTTTW FNRFLTSATE DEDDPRWCLY
101: FRMSKSTFFS LYSILSHSSL PSFAATIFRL AHGASYECLV HRFGFDSTSQ ASRSFFTVCK LINEKLSQQL DDPKPDFSPN LLPNCYGVVG FGRFEVKGKL
201: LGAKGSILVQ ALVDSNGRFV DISAGWPSTM KPEAIFRQTK LFSIAEEVLS GAPTKLGNGV LVPRYILGDS CLPLLPWLVT PYDLTSDEES FREEFNNVVH
301: TGLHSVEIAF AKVRARWRIL DKKWKPETIE FMPFVITTGC LLHNFLVNSG DDDDSVEECV NGCEAGDNGE MRKDDDKEEE TRSFEGEAYR ESKRIRDAIA
401: ENLSRVSSLR
101: FRMSKSTFFS LYSILSHSSL PSFAATIFRL AHGASYECLV HRFGFDSTSQ ASRSFFTVCK LINEKLSQQL DDPKPDFSPN LLPNCYGVVG FGRFEVKGKL
201: LGAKGSILVQ ALVDSNGRFV DISAGWPSTM KPEAIFRQTK LFSIAEEVLS GAPTKLGNGV LVPRYILGDS CLPLLPWLVT PYDLTSDEES FREEFNNVVH
301: TGLHSVEIAF AKVRARWRIL DKKWKPETIE FMPFVITTGC LLHNFLVNSG DDDDSVEECV NGCEAGDNGE MRKDDDKEEE TRSFEGEAYR ESKRIRDAIA
401: ENLSRVSSLR
Arabidopsis Description
LOW protein: nuclease-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AMV0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.