Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400078858 | Potato | nucleus | 83.41 | 82.67 |
| VIT_11s0118g00530.t01 | Wine grape | cytosol | 26.91 | 62.18 |
| TraesCS2B01G547100.1 | Wheat | mitochondrion | 34.53 | 35.08 |
| Zm00001d026435_P001 | Maize | plastid | 34.3 | 34.69 |
| TraesCS2A01G518800.1 | Wheat | plastid | 34.08 | 34.39 |
| TraesCS2D01G520200.1 | Wheat | mitochondrion | 33.41 | 33.94 |
| AT1G72275.1 | Thale cress | cytosol | 30.94 | 32.55 |
| Os04t0644200-00 | Rice | mitochondrion | 35.2 | 28.7 |
| Bra013151.1-P | Field mustard | plastid | 13.68 | 25.85 |
| CDX93109 | Canola | plastid | 13.68 | 25.63 |
| Solyc11g073090.1.1 | Tomato | cytosol | 18.61 | 25.23 |
| Solyc08g062680.1.1 | Tomato | cytosol | 8.74 | 24.84 |
| Solyc05g054670.2.1 | Tomato | cytosol | 20.85 | 23.54 |
| Solyc06g084150.2.1 | Tomato | cytosol | 18.16 | 22.07 |
| Solyc01g107920.2.1 | Tomato | extracellular, plasma membrane | 17.94 | 19.32 |
| Solyc12g009000.1.1 | Tomato | cytosol | 17.49 | 16.12 |
| Solyc07g040960.1.1 | Tomato | cytosol | 17.49 | 15.63 |
Protein Annotations
| EnsemblPlants:Solyc07g007360.1.1 | EnsemblPlantsGene:Solyc07g007360.1 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF87 | PFAM:PF13359 |
| SEG:seg | UniParc:UPI000276ABDA | UniProt:K4CBK6 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7:-:2102542..2103882
Molecular Weight (calculated)
49817.2 Da
IEP (calculated)
8.599
GRAVY (calculated)
-0.110
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAGRKRGR KKKKKMNKKI IKLTKKFKTT LQLRHQHCTK LIPQLIAAIS SAYSFLRRND LNLLPHQSLA LESLISSSST SISNIVSLLS LPPPPPRAAP
101: PPRAAVTSPS DDDPVPECWF QRFLMADSDT LWAETFNLTK PSFTLLLRLL TPSLSSLSVP PNYALALTLF RLAHGASYSA VSRRFGIDSP TACRVFYTVC
201: KAITENLGHL FELKSDINRV IVGFGWISLP NCCGVLGIEK FELGGDVLGE NGFMIVQALV DSEGRFLDVS AGWPSTMSPE TILRKSKLYL GVEESKEYLN
301: GSSFELNDGN SIPQYILGES CFPLLPWVLT PYRGESSVED GAEVAFNSVH RRGMQLVGTA FGRVRENWKL LTRKWNKQCI EAFPFLIVTC CLLHNFLIKC
401: SEAVTDETEE YPRFEEFPVF DGEVDESGKK IRDALASHLF RVSQRE
101: PPRAAVTSPS DDDPVPECWF QRFLMADSDT LWAETFNLTK PSFTLLLRLL TPSLSSLSVP PNYALALTLF RLAHGASYSA VSRRFGIDSP TACRVFYTVC
201: KAITENLGHL FELKSDINRV IVGFGWISLP NCCGVLGIEK FELGGDVLGE NGFMIVQALV DSEGRFLDVS AGWPSTMSPE TILRKSKLYL GVEESKEYLN
301: GSSFELNDGN SIPQYILGES CFPLLPWVLT PYRGESSVED GAEVAFNSVH RRGMQLVGTA FGRVRENWKL LTRKWNKQCI EAFPFLIVTC CLLHNFLIKC
401: SEAVTDETEE YPRFEEFPVF DGEVDESGKK IRDALASHLF RVSQRE
001: MVAGKRKSDR NPTNVSDKLG LKDPLLRRLS SAAAVTNSFL QANDLFLSPS QTLRLESLIS SLPISPSPSS SSSAITTTTW FNRFLTSATE DEDDPRWCLY
101: FRMSKSTFFS LYSILSHSSL PSFAATIFRL AHGASYECLV HRFGFDSTSQ ASRSFFTVCK LINEKLSQQL DDPKPDFSPN LLPNCYGVVG FGRFEVKGKL
201: LGAKGSILVQ ALVDSNGRFV DISAGWPSTM KPEAIFRQTK LFSIAEEVLS GAPTKLGNGV LVPRYILGDS CLPLLPWLVT PYDLTSDEES FREEFNNVVH
301: TGLHSVEIAF AKVRARWRIL DKKWKPETIE FMPFVITTGC LLHNFLVNSG DDDDSVEECV NGCEAGDNGE MRKDDDKEEE TRSFEGEAYR ESKRIRDAIA
401: ENLSRVSSLR
101: FRMSKSTFFS LYSILSHSSL PSFAATIFRL AHGASYECLV HRFGFDSTSQ ASRSFFTVCK LINEKLSQQL DDPKPDFSPN LLPNCYGVVG FGRFEVKGKL
201: LGAKGSILVQ ALVDSNGRFV DISAGWPSTM KPEAIFRQTK LFSIAEEVLS GAPTKLGNGV LVPRYILGDS CLPLLPWLVT PYDLTSDEES FREEFNNVVH
301: TGLHSVEIAF AKVRARWRIL DKKWKPETIE FMPFVITTGC LLHNFLVNSG DDDDSVEECV NGCEAGDNGE MRKDDDKEEE TRSFEGEAYR ESKRIRDAIA
401: ENLSRVSSLR
Arabidopsis Description
LOW protein: nuclease-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AMV0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.