Factsheet for Solyc06g084150.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040441.1-P	Field mustard	cytosol	62.94	60.0
AT3G63270.1	Thale cress	cytosol	63.49	58.84
VIT_07s0151g00360.t01	Wine grape	cytosol	68.12	58.41
Zm00001d018916_P001	Maize	cytosol	58.31	52.84
Os07t0175100-01	Rice	nucleus	59.4	50.0
TraesCS2B01G258800.1	Wheat	cytosol	60.22	48.46
TraesCS2A01G244500.1	Wheat	nucleus	60.22	48.36
Solyc11g073090.1.1	Tomato	cytosol	36.78	41.03
Solyc05g054670.2.1	Tomato	cytosol	42.23	39.24
Solyc08g062680.1.1	Tomato	cytosol	11.17	26.11
Solyc12g009000.1.1	Tomato	cytosol	24.52	18.59
Solyc07g007360.1.1	Tomato	cytosol, mitochondrion, nucleus	22.07	18.16
Solyc07g040960.1.1	Tomato	cytosol	23.71	17.43
Solyc01g107920.2.1	Tomato	extracellular, plasma membrane	17.71	15.7

Protein Annotations

MapMan:35.1	GO:GO:0003674	GO:GO:0003682	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0031936	GO:GO:0035098	GO:GO:0035102
GO:GO:0040029	InterPro:HARBI1_dom	UniProt:K4CAS0	PFAM:PF13359	PANTHER:PTHR22930	PANTHER:PTHR22930:SF26
EnsemblPlantsGene:Solyc06g084150.2	EnsemblPlants:Solyc06g084150.2.1	UniParc:UPI000276B9B0	SEG:seg	:	:

Description

No Description!

Coordinates

chr6:-:49370099..49372380

Molecular Weight (calculated)

41256.7 Da

IEP (calculated)

8.752

GRAVY (calculated)

-0.405

Length

367 amino acids

Sequence
(BLAST)

001: MAPLKKSKKD SNKLKKIKAK NKKNNIVPAE NKGTECDWWD SFWHKNKTST PGSGVPSDEE EGFKYFFRVS NKTFDYICSL VREDLISRPP SGLINIEGRL
101: LSVEKQVAIA LRRLASGESQ VSVGASFGVG QSTVSQVTWR FIEALEERAK HHLKWPEPND WCDQESNYSM LLQGIVDSEM RFLDIVTGWP GGMTTSRLFK
201: CSGFYKLCES GDRLNGNVKM MSEGAEVREY ILGGLGYPLL PWLITPYEGE DLSDPMLDFN AVHETASSVA VKAFSQLKGG WRILNKVMWR PDKQKLPSII
301: LVCCLLHNII IDCGDKLHPD VAVSGHHDPG YEGQSCKQIE SVGRLMRGKL TKYLRSTKKE GSMKMIV

Best Arabidopsis Sequence Match ( AT3G63270.1 )
(BLAST)

001: MAPVKQKKKN KKKPLDKAKK LAKNKEKKRV NAVPLDPEAI DCDWWDTFWL RNSSPSVPSD EDYAFKHFFR ASKTTFSYIC SLVREDLISR PPSGLINIEG
101: RLLSVEKQVA IALRRLASGD SQVSVGAAFG VGQSTVSQVT WRFIEALEER AKHHLRWPDS DRIEEIKSKF EEMYGLPNCC GAIDTTHIIM TLPAVQASDD
201: WCDQEKNYSM FLQGVFDHEM RFLNMVTGWP GGMTVSKLLK FSGFFKLCEN AQILDGNPKT LSQGAQIREY VVGGISYPLL PWLITPHDSD HPSDSMVAFN
301: ERHEKVRSVA ATAFQQLKGS WRILSKVMWR PDRRKLPSII LVCCLLHNII IDCGDYLQED VPLSGHHDSG YADRYCKQTE PLGSELRGCL TEHLLR

Arabidopsis Description

ALP1Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94K49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.