Factsheet for TraesCS2A01G244500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G258800.1	Wheat	cytosol	95.19	95.39
Os07t0175100-01	Rice	nucleus	68.27	71.56
Zm00001d018916_P001	Maize	cytosol	62.58	70.62
Bra040441.1-P	Field mustard	cytosol	51.42	61.04
Solyc06g084150.2.1	Tomato	cytosol	48.36	60.22
AT3G63270.1	Thale cress	cytosol	51.64	59.6
VIT_07s0151g00360.t01	Wine grape	cytosol	52.3	55.84
TraesCS3A01G356500.1	Wheat	mitochondrion	34.35	39.65
TraesCS1A01G441100.1	Wheat	cytosol	21.01	20.78
TraesCS1A01G121900.1	Wheat	cytosol, extracellular, plasma membrane	20.57	19.67
TraesCS2A01G518800.1	Wheat	plastid	18.6	19.23
TraesCS3A01G209100.1	Wheat	cytosol, nucleus, plastid	21.23	18.2
TraesCS3A01G110000.1	Wheat	cytosol	19.91	17.6

Protein Annotations

MapMan:12.3.3.1.2.4	GO:GO:0003674	GO:GO:0003682	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0031936	GO:GO:0035098	GO:GO:0035102
GO:GO:0040029	InterPro:HARBI1_dom	PFAM:PF13359	PANTHER:PTHR22930	PANTHER:PTHR22930:SF26	EnsemblPlantsGene:TraesCS2A01G244500
EnsemblPlants:TraesCS2A01G244500.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:349725863..349727481

Molecular Weight (calculated)

51334.4 Da

IEP (calculated)

7.190

GRAVY (calculated)

-0.507

Length

457 amino acids

Sequence
(BLAST)

001: MGSQGSEEKA TGQEQEGLEG GGRIEERSQK MAPVKKPKKA KRKISDSGET KIDDSSEAKT KDASKVKRTK SGGSLALLPA DLRGPDTEWW YVFLSKHGEL
101: HKEAESRGRA PVPSDDEEAF RYFFRTSRRT FEYICSIVRE DLISRPPSGL INIEGRLLSV EKQVAIAMRR LASGDSQVSV GAAFGVGQST VSQVTWRFIE
201: SMEERARHHL VWPGQERMEE IKARLEAVSG LPNCCGAIDA THIIMTLPAV ESSEDWCDPA KNYSMFLQGI VDNEMRFIDI VTGWPGSMTF SRLLKCSGFY
301: KLCEAGKRLN GPVRTSGEDS EIREFIVGDM CYPLLPWLMT PYQGESLSTP MVNFNARQKT ARMLGTRALA RLKGSWKILH KVMWRPDKNK LPSIILVCCL
401: LHNIILDCND KLLPDIQLPD HHDNGYNEEN CQQENPNGKV IREIITGYLP TYEETSN

Best Arabidopsis Sequence Match ( AT3G63270.1 )
(BLAST)

001: MAPVKQKKKN KKKPLDKAKK LAKNKEKKRV NAVPLDPEAI DCDWWDTFWL RNSSPSVPSD EDYAFKHFFR ASKTTFSYIC SLVREDLISR PPSGLINIEG
101: RLLSVEKQVA IALRRLASGD SQVSVGAAFG VGQSTVSQVT WRFIEALEER AKHHLRWPDS DRIEEIKSKF EEMYGLPNCC GAIDTTHIIM TLPAVQASDD
201: WCDQEKNYSM FLQGVFDHEM RFLNMVTGWP GGMTVSKLLK FSGFFKLCEN AQILDGNPKT LSQGAQIREY VVGGISYPLL PWLITPHDSD HPSDSMVAFN
301: ERHEKVRSVA ATAFQQLKGS WRILSKVMWR PDRRKLPSII LVCCLLHNII IDCGDYLQED VPLSGHHDSG YADRYCKQTE PLGSELRGCL TEHLLR

Arabidopsis Description

ALP1Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94K49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.