Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g084150.2.1 | Tomato | cytosol | 58.41 | 68.12 |
| AT3G63270.1 | Thale cress | cytosol | 61.92 | 66.92 |
| Bra040441.1-P | Field mustard | cytosol | 59.58 | 66.23 |
| Zm00001d018916_P001 | Maize | cytosol | 54.91 | 58.02 |
| Os07t0175100-01 | Rice | nucleus | 56.78 | 55.73 |
| TraesCS2B01G258800.1 | Wheat | cytosol | 55.84 | 52.41 |
| TraesCS2A01G244500.1 | Wheat | nucleus | 55.84 | 52.3 |
| VIT_06s0004g04160.t01 | Wine grape | nucleus | 42.06 | 46.88 |
| VIT_13s0019g00460.t01 | Wine grape | plastid | 35.05 | 38.86 |
| VIT_11s0118g00530.t01 | Wine grape | cytosol | 11.21 | 24.87 |
| VIT_04s0008g01380.t01 | Wine grape | nucleus | 22.43 | 19.83 |
| VIT_03s0063g00150.t01 | Wine grape | extracellular, vacuole | 20.79 | 19.6 |
| VIT_11s0016g01810.t01 | Wine grape | nucleus | 22.2 | 18.66 |
| VIT_03s0063g00920.t01 | Wine grape | plastid | 19.39 | 18.49 |
Protein Annotations
| ArrayExpress:VIT_07s0151g00360 | EMBL:FN595764 | EnsemblPlants:VIT_07s0151g00360.t01 | EnsemblPlantsGene:VIT_07s0151g00360 | InterPro:HARBI1_dom | PANTHER:PTHR22930 |
| PANTHER:PTHR22930:SF26 | PFAM:PF13359 | ProteinID:CCB51912 | ProteinID:CCB51912.1 | SEG:seg | UniParc:UPI000210821E |
| UniProt:F6HI66 | MapMan:12.3.3.1.2.4 | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:890708..893206
Molecular Weight (calculated)
48243.0 Da
IEP (calculated)
8.835
GRAVY (calculated)
-0.364
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPKKSKKA KRESKKSKKC KSMSVVPIEP RATESDWWDS FWQKNSPIPV FSATKWRDEC NPFKNASVMK IFYTVSDCSA IPTDEAEGFK FFFRVSKKTF
101: DYICSLVRQD LVSRPPSGLI NIEGRLLSVE KQVAIALRRL ASGESQVSVG AAFGVGQSTV SQVTWRFIEA VEERAKHHLR WPDFNRMEEI KSKFETSYGL
201: SNCCGAIDAT HIIMTLPAVQ TSDDWCDQEN NYSMFLQGVV DDEMRFLDIV TGWPGGMTVS RLLKCTGFYR NCEAGERLNG NVRILSEGAE IREYVVGGVG
301: YPLLPWLITP CEYNDIPSSM SGFKTNHEAA RSLAVRAFSQ LKGTWRILSK VMWRPDKRKL PSIILVCCLL HNIIIDSKDK LQPDVALSSH HDPGYGQQCC
401: KQVDPLGKAM RENIAKHLQH GKEKAPSN
101: DYICSLVRQD LVSRPPSGLI NIEGRLLSVE KQVAIALRRL ASGESQVSVG AAFGVGQSTV SQVTWRFIEA VEERAKHHLR WPDFNRMEEI KSKFETSYGL
201: SNCCGAIDAT HIIMTLPAVQ TSDDWCDQEN NYSMFLQGVV DDEMRFLDIV TGWPGGMTVS RLLKCTGFYR NCEAGERLNG NVRILSEGAE IREYVVGGVG
301: YPLLPWLITP CEYNDIPSSM SGFKTNHEAA RSLAVRAFSQ LKGTWRILSK VMWRPDKRKL PSIILVCCLL HNIIIDSKDK LQPDVALSSH HDPGYGQQCC
401: KQVDPLGKAM RENIAKHLQH GKEKAPSN
001: MAPVKQKKKN KKKPLDKAKK LAKNKEKKRV NAVPLDPEAI DCDWWDTFWL RNSSPSVPSD EDYAFKHFFR ASKTTFSYIC SLVREDLISR PPSGLINIEG
101: RLLSVEKQVA IALRRLASGD SQVSVGAAFG VGQSTVSQVT WRFIEALEER AKHHLRWPDS DRIEEIKSKF EEMYGLPNCC GAIDTTHIIM TLPAVQASDD
201: WCDQEKNYSM FLQGVFDHEM RFLNMVTGWP GGMTVSKLLK FSGFFKLCEN AQILDGNPKT LSQGAQIREY VVGGISYPLL PWLITPHDSD HPSDSMVAFN
301: ERHEKVRSVA ATAFQQLKGS WRILSKVMWR PDRRKLPSII LVCCLLHNII IDCGDYLQED VPLSGHHDSG YADRYCKQTE PLGSELRGCL TEHLLR
101: RLLSVEKQVA IALRRLASGD SQVSVGAAFG VGQSTVSQVT WRFIEALEER AKHHLRWPDS DRIEEIKSKF EEMYGLPNCC GAIDTTHIIM TLPAVQASDD
201: WCDQEKNYSM FLQGVFDHEM RFLNMVTGWP GGMTVSKLLK FSGFFKLCEN AQILDGNPKT LSQGAQIREY VVGGISYPLL PWLITPHDSD HPSDSMVAFN
301: ERHEKVRSVA ATAFQQLKGS WRILSKVMWR PDRRKLPSII LVCCLLHNII IDCGDYLQED VPLSGHHDSG YADRYCKQTE PLGSELRGCL TEHLLR
Arabidopsis Description
ALP1Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94K49]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.