Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P00980_001 | Banana | endoplasmic reticulum, plasma membrane | 45.15 | 49.04 |
| PGSC0003DMT400066745 | Potato | endoplasmic reticulum, plasma membrane | 43.17 | 46.23 |
| Solyc01g107920.2.1 | Tomato | extracellular, plasma membrane | 41.19 | 45.17 |
| Zm00001d045208_P001 | Maize | endoplasmic reticulum, vacuole | 28.41 | 33.77 |
| TraesCS7D01G124800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 28.41 | 33.68 |
| TraesCS7B01G026400.1 | Wheat | endoplasmic reticulum, plasma membrane | 28.85 | 33.59 |
| Os06t0164500-00 | Rice | mitochondrion | 28.85 | 30.05 |
| VIT_11s0118g00530.t01 | Wine grape | cytosol | 10.35 | 24.35 |
| VIT_06s0004g04160.t01 | Wine grape | nucleus | 19.16 | 22.66 |
| VIT_07s0151g00360.t01 | Wine grape | cytosol | 19.6 | 20.79 |
| VIT_13s0019g00460.t01 | Wine grape | plastid | 17.4 | 20.47 |
| VIT_11s0016g01810.t01 | Wine grape | nucleus | 19.6 | 17.49 |
| VIT_03s0063g00920.t01 | Wine grape | plastid | 16.96 | 17.15 |
| VIT_04s0008g01380.t01 | Wine grape | nucleus | 17.62 | 16.53 |
Protein Annotations
| ArrayExpress:VIT_03s0063g00150 | EMBL:FN596006 | EnsemblPlants:VIT_03s0063g00150.t01 | EnsemblPlantsGene:VIT_03s0063g00150 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF121 | PFAM:PF13359 | ProteinID:CCB56849 |
| ProteinID:CCB56849.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001982DC5 | UniProt:F6HQ92 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:3738817..3740627
Molecular Weight (calculated)
50025.8 Da
IEP (calculated)
5.867
GRAVY (calculated)
-0.067
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSRALAALL SSLISELLLL LLLLFPSSNP LTITSNSNSG SNFYETIFPL IHHFLSSAEL VTSLSLLSIS RKRKRTHQPD LDNEDEEDEP GSELARFELG
101: LTQNPDSFKG CFRMTSSTFE WLSGLLEPLL DCRDPIGSPL NLAPEIRLGI GLFRLATGSD YPEIARRFGV SESITRFCVK QLCRVLCTNF RFWIAFPSPI
201: DLDSLSTSFE ALTGLPNCCG VIDCTRFKIV RNNGFKLSPK EEVREESIAA QIVVDSSSRI LSIVAGFRGD KGESRVLKSS TLYKDIEGGS LLNAPPVYMN
301: GVGINQYLIG DGGYPLLPWL MVPFVDPAPG SYEENFNSAH HLMHISALRA IASLKDWGVL RQTIEGEFKM AVAYIGSCAI LHNVLLMRDD YSALSDGLGD
401: YSQSPQYCRN ASLEESPIER NASVIRNALA TRARKFHSSS HSMDPGGSVK AEPR
101: LTQNPDSFKG CFRMTSSTFE WLSGLLEPLL DCRDPIGSPL NLAPEIRLGI GLFRLATGSD YPEIARRFGV SESITRFCVK QLCRVLCTNF RFWIAFPSPI
201: DLDSLSTSFE ALTGLPNCCG VIDCTRFKIV RNNGFKLSPK EEVREESIAA QIVVDSSSRI LSIVAGFRGD KGESRVLKSS TLYKDIEGGS LLNAPPVYMN
301: GVGINQYLIG DGGYPLLPWL MVPFVDPAPG SYEENFNSAH HLMHISALRA IASLKDWGVL RQTIEGEFKM AVAYIGSCAI LHNVLLMRDD YSALSDGLGD
401: YSQSPQYCRN ASLEESPIER NASVIRNALA TRARKFHSSS HSMDPGGSVK AEPR
001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
Arabidopsis Description
Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.