Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G026400.1 | Wheat | endoplasmic reticulum, plasma membrane | 72.58 | 71.28 |
| Zm00001d045208_P001 | Maize | endoplasmic reticulum, vacuole | 63.19 | 63.35 |
| Os06t0164500-00 | Rice | mitochondrion | 59.79 | 52.52 |
| GSMUA_Achr9P00980_001 | Banana | endoplasmic reticulum, plasma membrane | 38.64 | 35.41 |
| VIT_03s0063g00150.t01 | Wine grape | extracellular, vacuole | 33.68 | 28.41 |
| Solyc01g107920.2.1 | Tomato | extracellular, plasma membrane | 28.98 | 26.81 |
| PGSC0003DMT400066745 | Potato | endoplasmic reticulum, plasma membrane | 28.72 | 25.94 |
| TraesCS2D01G520200.1 | Wheat | mitochondrion | 24.02 | 20.96 |
| TraesCS3D01G350500.1 | Wheat | mitochondrion | 19.06 | 18.43 |
| TraesCS1D01G122700.1 | Wheat | cytosol, extracellular, peroxisome | 21.67 | 17.36 |
| TraesCS3D01G318900.1 | Wheat | cytosol | 18.28 | 15.87 |
| TraesCS1D01G449600.1 | Wheat | cytosol | 18.28 | 14.89 |
| TraesCS3D01G212000.1 | Wheat | cytosol, mitochondrion, nucleus | 19.32 | 13.91 |
| TraesCS3D01G111900.1 | Wheat | cytosol | 18.28 | 12.92 |
| TraesCS3D01G111700.2 | Wheat | cytosol | 18.02 | 12.87 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G124800.1 | EnsemblPlantsGene:TraesCS7D01G124800 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF121 | PFAM:PF13359 |
| SEG:seg | SignalP:SignalP-noTM | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7D:+:78206831..78208355
Molecular Weight (calculated)
40738.2 Da
IEP (calculated)
8.157
GRAVY (calculated)
-0.047
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPPPSSQPL LLLTHQLLSA VSVLVLDLLG PSPDPDAARK RRRTDGDGDE AGPATPVAPP PPLPPPSPLL PLPPTSPDHY PLAFRVSAPT FHYLSGLLDP
101: LLSHPSLPCP TLLALALARL ASGLPYPALA ALFRVPPSAP RAASRRLRRV LLANFRFWLA FPSDPAGASS SPLPSCRGAL ACARFAGPGG PLAAQLVAGA
201: SSRILSLAAG FRGDRADLEV LRLSSLHQEL EQGKLLNPAQ YLVADGNGYP LLRWLMLPFE GPVVPGSPEA HFNTAHKAMC RPARRAIRSL MGWGAIARLH
301: EEESPRAAVT CIGTCAMLHN VLLAREDYSA LAPEEGEEEA ETDLGAMQSR RDHAAEEGFK VDKRAVALRS ALAATMNDWR TPA
101: LLSHPSLPCP TLLALALARL ASGLPYPALA ALFRVPPSAP RAASRRLRRV LLANFRFWLA FPSDPAGASS SPLPSCRGAL ACARFAGPGG PLAAQLVAGA
201: SSRILSLAAG FRGDRADLEV LRLSSLHQEL EQGKLLNPAQ YLVADGNGYP LLRWLMLPFE GPVVPGSPEA HFNTAHKAMC RPARRAIRSL MGWGAIARLH
301: EEESPRAAVT CIGTCAMLHN VLLAREDYSA LAPEEGEEEA ETDLGAMQSR RDHAAEEGFK VDKRAVALRS ALAATMNDWR TPA
001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
Arabidopsis Description
Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.