Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7D01G124800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 71.28 | 72.58 |
Zm00001d045208_P001 | Maize | endoplasmic reticulum, vacuole | 62.05 | 63.35 |
Os06t0164500-00 | Rice | mitochondrion | 60.77 | 54.36 |
GSMUA_Achr9P00980_001 | Banana | endoplasmic reticulum, plasma membrane | 39.23 | 36.6 |
VIT_03s0063g00150.t01 | Wine grape | extracellular, vacuole | 33.59 | 28.85 |
PGSC0003DMT400066745 | Potato | endoplasmic reticulum, plasma membrane | 29.49 | 27.12 |
Solyc01g107920.2.1 | Tomato | extracellular, plasma membrane | 28.72 | 27.05 |
TraesCS2B01G547100.1 | Wheat | mitochondrion | 22.82 | 20.27 |
TraesCS3B01G389300.1 | Wheat | mitochondrion | 18.97 | 18.73 |
TraesCS1B01G141100.1 | Wheat | cytosol, extracellular, peroxisome | 21.54 | 17.72 |
TraesCS2B01G258800.1 | Wheat | cytosol | 18.97 | 16.23 |
TraesCS1B01G475800.1 | Wheat | cytosol, nucleus, plastid | 19.23 | 15.92 |
TraesCS3B01G129100.1 | Wheat | cytosol | 20.26 | 14.91 |
TraesCS3B01G239400.1 | Wheat | cytosol | 19.74 | 14.53 |
Protein Annotations
EnsemblPlants:TraesCS7B01G026400.1 | EnsemblPlantsGene:TraesCS7B01G026400 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF121 | PFAM:PF13359 |
SEG:seg | SignalP:SignalP-noTM | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7B:+:25628145..25629518
Molecular Weight (calculated)
41254.7 Da
IEP (calculated)
7.840
GRAVY (calculated)
-0.022
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPPPSSQPL LLLTHQLLSA VSVLVLDLLG PDPDPARKRR RSDSDGDGDG AEAGPATPVV VAVPPPPLPP PPPSPPLPLP PTSPDHYPLA FRVSAPTFHY
101: LSGLLDPLLS HPSLPCPTLL ALALARLASG LPYPALAALF RVPPSAPRAA SRRLRRVLLA NFCFWLAFPS NSASSSSSSP LPSCRGALAC ARFAGPGGPL
201: AAQLVAGASS RILSLAAGFR GDRADLEVLR LSSLHQELEQ GKLLDPAQYL VADGNGYPLL RWLMVPFEGA VAPGSPEAHF NAAHRAMCRP ARRAVRSLMG
301: WGAIARLHEE ESPRAAVTCI GTCAMLHNVL LAREDYSALA PEEGDEPEND LGAMQSRRDH AAEEGFKVDK RAVALRSALA ATMSDWRTPV
101: LSGLLDPLLS HPSLPCPTLL ALALARLASG LPYPALAALF RVPPSAPRAA SRRLRRVLLA NFCFWLAFPS NSASSSSSSP LPSCRGALAC ARFAGPGGPL
201: AAQLVAGASS RILSLAAGFR GDRADLEVLR LSSLHQELEQ GKLLDPAQYL VADGNGYPLL RWLMVPFEGA VAPGSPEAHF NAAHRAMCRP ARRAVRSLMG
301: WGAIARLHEE ESPRAAVTCI GTCAMLHNVL LAREDYSALA PEEGDEPEND LGAMQSRRDH AAEEGFKVDK RAVALRSALA ATMSDWRTPV
001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
Arabidopsis Description
Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.