Factsheet for TraesCS1B01G141100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
extracellular 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, peroxisome
Any Predictor:	cytosol, extracellular, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G122700.1	Wheat	cytosol, extracellular, peroxisome	86.29	85.56
TraesCS1A01G121900.1	Wheat	cytosol, extracellular, plasma membrane	85.86	85.15
Os05t0184901-01	Rice	cytosol, endoplasmic reticulum, peroxisome	56.75	57.48
Os05t0183900-00	Rice	cytosol	54.43	53.42
Zm00001d010344_P001	Maize	cytosol	52.32	52.21
Zm00001d010356_P001	Maize	nucleus	50.63	50.31
GSMUA_Achr5P22180_001	Banana	nucleus	33.76	48.48
Solyc08g062680.1.1	Tomato	cytosol	16.03	48.41
GSMUA_Achr6P04860_001	Banana	cytosol, nucleus, plastid	34.18	47.79
GSMUA_Achr6P00850_001	Banana	nucleus	38.4	47.64
PGSC0003DMT400000875	Potato	cytosol	41.98	44.62
TraesCS1B01G475800.1	Wheat	cytosol, nucleus, plastid	44.3	44.59
Solyc12g009000.1.1	Tomato	cytosol	43.88	42.98
VIT_11s0016g01810.t01	Wine grape	nucleus	44.94	41.85
Solyc07g040960.1.1	Tomato	cytosol	42.83	40.68
Os05t0184500-00	Rice	cytosol	30.38	40.68
PGSC0003DMT400027828	Potato	cytosol	43.25	40.51
TraesCS3B01G239400.1	Wheat	cytosol	44.73	40.0
TraesCS3B01G129100.1	Wheat	cytosol	44.3	39.62
AT4G29780.1	Thale cress	cytosol	41.56	36.48
Zm00001d010347_P001	Maize	nucleus, plastid	21.73	33.33
TraesCS3B01G389300.1	Wheat	mitochondrion	21.94	26.33
TraesCS2B01G547100.1	Wheat	mitochondrion	20.25	21.87
TraesCS7B01G026400.1	Wheat	endoplasmic reticulum, plasma membrane	17.72	21.54
TraesCS2B01G258800.1	Wheat	cytosol	20.46	21.27

Protein Annotations

EnsemblPlants:TraesCS1B01G141100.1	EnsemblPlantsGene:TraesCS1B01G141100	InterPro:HARBI1_dom	PANTHER:PTHR22930	PANTHER:PTHR22930:SF64	PFAM:PF13359
SEG:seg	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:188260734..188262158

Molecular Weight (calculated)

51018.3 Da

IEP (calculated)

6.557

GRAVY (calculated)

-0.201

Length

474 amino acids

Sequence
(BLAST)

001: MSTYLTPFTP LPSLFDGPAA ADDHSSLLAF LMNDDLAAAP DAFPYYGAAE AAPAFFGHAA APLPPPPAEM TGQGRKRGFV PAGDDGSSRP QAVRRKVQGS
101: PPTSPAHSGG DAAPAARSGG RRVWVRERST EWWDRLSCPA CPDAEFRQAF RMSRATFDAL CDELSAAVAK EDTALRAAIP VHQRVAVCLW RLATGEPLRE
201: VSRRFGLGIS TCHNIVLQVC AALTAVLLPK AVRWPLESPA SRFQAMSGIP GVVGSVYTDH IPIGPPKDNV AEYYNRRLTE RNNKASYSVA VQAVVDADGA
301: FTDVCIGLPG SLSDAAVLER SALHARCETG MLGDDQCRLV GGASYPLTDW MLVPYAHQNL TWAQHAFNER IAAAHAAAQG AFQRLKGRWR CLQRRTEPKL
401: PDLHNMIGAC CVLHNFCERS GEELDADIQS ELSQQDDAGV VAAANPVLSA EADKERDRIA HDLLHGGHPS VTFL

Best Arabidopsis Sequence Match ( AT4G29780.1 )
(BLAST)

001: MEISSFPFPY LQDDECSHFL GLFQDMDSSP STFGLEGFNS NDNNTNQKKR PRKDDEGGGG GGGGTEVLGA VNGNNKAAFG DILATLLLLD EEAKQQQEQW
101: DFEFIKEKSL LEANHKKKVK TMDGYYNQMQ DHYSAAGETD GSRSKRARKT AVAAVVSAVA SGADTTGLAA PVPTADIASG SGSGPSHRRL WVKERTTDWW
201: DRVSRPDFPE DEFRREFRMS KSTFNLICEE LDTTVTKKNT MLRDAIPAPK RVGVCVWRLA TGAPLRHVSE RFGLGISTCH KLVIEVCRAI YDVLMPKYLL
301: WPSDSEINST KAKFESVHKI PNVVGSIYTT HIPIIAPKVH VAAYFNKRHT ERNQKTSYSI TVQGVVNADG IFTDVCIGNP GSLTDDQILE KSSLSRQRAA
401: RGMLRDSWIV GNSGFPLTDY LLVPYTRQNL TWTQHAFNES IGEIQGIATA AFERLKGRWA CLQKRTEVKL QDLPYVLGAC CVLHNICEMR KEEMLPELKF
501: EVFDDVAVPE NNIRSASAVN TRDHISHNLL HRGLAGTRTL

Arabidopsis Description

Nuclease [Source:UniProtKB/TrEMBL;Acc:Q84J48]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.