Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G212000.1 Wheat cytosol, mitochondrion, nucleus 94.34 93.98
TraesCS3A01G209100.1 Wheat cytosol, nucleus, plastid 88.87 88.37
Os01t0582600-01 Rice nucleus 74.53 71.69
Zm00001d044300_P001 Maize cytosol 72.08 67.25
Solyc08g062680.1.1 Tomato cytosol 19.81 66.88
TraesCS1B01G475800.1 Wheat cytosol, nucleus, plastid 54.15 60.93
VIT_11s0016g01810.t01 Wine grape nucleus 53.96 56.19
PGSC0003DMT400000875 Potato cytosol 47.17 56.05
GSMUA_Achr6P00850_001 Banana nucleus 39.81 55.24
GSMUA_Achr6P04860_001 Banana cytosol, nucleus, plastid 34.72 54.28
GSMUA_Achr5P22180_001 Banana nucleus 33.58 53.94
PGSC0003DMT400027828 Potato cytosol 50.57 52.96
Solyc07g040960.1.1 Tomato cytosol 48.49 51.5
Solyc12g009000.1.1 Tomato cytosol 46.6 51.03
AT4G29780.1 Thale cress cytosol 48.11 47.22
TraesCS1B01G141100.1 Wheat cytosol, extracellular, peroxisome 40.0 44.73
TraesCS3B01G129100.1 Wheat cytosol 38.49 38.49
TraesCS3B01G389300.1 Wheat mitochondrion 18.87 25.32
TraesCS2B01G258800.1 Wheat cytosol 18.11 21.05
TraesCS2B01G547100.1 Wheat mitochondrion 16.79 20.27
TraesCS7B01G026400.1 Wheat endoplasmic reticulum, plasma membrane 14.53 19.74
Protein Annotations
EnsemblPlants:TraesCS3B01G239400.1EnsemblPlantsGene:TraesCS3B01G239400InterPro:HARBI1_domncoils:CoilPANTHER:PTHR22930PANTHER:PTHR22930:SF113
PFAM:PF13359SEG:segMapMan:35.1:::
Description
No Description!
Coordinates
chr3B:+:377710607..377712199
Molecular Weight (calculated)
57903.5 Da
IEP (calculated)
6.452
GRAVY (calculated)
-0.282
Length
530 amino acids
Sequence
(BLAST)
001: MRSPSGARPS SGGGAAADDD FAFYYSFFQD AAAASPLPLA LDGAAMPNNR RRKRGGDDDS AAEPIKDGSN NGRKRSIATI ITSLAALEAE DHADSAGAAD
101: ASRRELALLE SNADNKSQAM MDYFAKMEGS FDADADSEAA EARSGLSASA AAVAVVAAEE AATNTAASAS PPRAGHHQRR LWVKDRSQAW WDQCNSPDFP
201: EAEFRRAFRM GRETFDMICE ALGSAVAKED TMLRAAIPVR QRVAVCIWRL ATGEPLRLVS KRFGLGISTC HKLVLEVCGA IKSVLMPRFL QWPDEAAAGR
301: FKEGFERSFG VPGVIGAMYT THIPIIAPKI SVAAYFNRRH TERNQKTSYS ITLQGVVGPD RAFTDVCIGW PGSMPDDQVL EKSMLHQRAA AGMMHDACLV
401: GGASYPLMDW VLVPYTHQNL TWTQHAFNEK VGDIRNVAVE AFARLKTRWA CLQKRTEVKL QDLPVVLGAC CVLHNICEMR REELEPEVPF ALFDDDTTPE
501: TPVRSETAKQ ERDSIAHNLL HRGFAGTTFF
Best Arabidopsis Sequence Match ( AT5G12010.1 )
(BLAST)
001: MKAAVFRNED GDEEEEEEEE EEVCNVFDGG EVESKRNNET KNLKGFFTSL LLMEEHEKQD QEARNAASRR EMSDFQSNYR KRARTMSDYY SDLNDYYADA
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL
Arabidopsis Description
AT5g12010/F14F18_180 [Source:UniProtKB/TrEMBL;Acc:Q9LYH2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.