Factsheet for TraesCS3A01G209100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G212000.1	Wheat	cytosol, mitochondrion, nucleus	93.62	93.8
TraesCS3B01G239400.1	Wheat	cytosol	88.37	88.87
Os01t0582600-01	Rice	nucleus	76.74	74.23
Zm00001d044300_P001	Maize	cytosol	71.29	66.9
Solyc08g062680.1.1	Tomato	cytosol	19.7	66.88
TraesCS1A01G441100.1	Wheat	cytosol	52.91	61.04
PGSC0003DMT400000875	Potato	cytosol	47.84	57.17
VIT_11s0016g01810.t01	Wine grape	nucleus	54.22	56.78
GSMUA_Achr6P00850_001	Banana	nucleus	39.59	55.24
GSMUA_Achr5P22180_001	Banana	nucleus	33.58	54.24
GSMUA_Achr6P04860_001	Banana	cytosol, nucleus, plastid	34.15	53.69
PGSC0003DMT400027828	Potato	cytosol	50.66	53.36
Solyc07g040960.1.1	Tomato	cytosol	48.59	51.9
Solyc12g009000.1.1	Tomato	cytosol	46.72	51.45
AT4G29780.1	Thale cress	cytosol	48.22	47.59
TraesCS1A01G121900.1	Wheat	cytosol, extracellular, plasma membrane	40.15	44.77
TraesCS3A01G110000.1	Wheat	cytosol	38.65	39.85
TraesCS3A01G356500.1	Wheat	mitochondrion	19.7	26.52
TraesCS2A01G244500.1	Wheat	nucleus	18.2	21.23
TraesCS2A01G518800.1	Wheat	plastid	16.51	19.91

Protein Annotations

EnsemblPlants:TraesCS3A01G209100.1	EnsemblPlantsGene:TraesCS3A01G209100	InterPro:HARBI1_dom	ncoils:Coil	PANTHER:PTHR22930	PANTHER:PTHR22930:SF113
PFAM:PF13359	SEG:seg	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3A:+:371321958..371323559

Molecular Weight (calculated)

58256.1 Da

IEP (calculated)

7.318

GRAVY (calculated)

-0.271

Length

533 amino acids

Sequence
(BLAST)

001: MRSPSAARPS SGGGAADDDF AFYYSFFQDA AAASPLPLAL DGAVAAMPNN RRRKRGGDDD SAVAPIKDGS NNGRKRSIAT IITSLAALEA EGHADSAGAA
101: DASRRELALL ESNADNKSQA MMDYFAKMEG SFDADADSEA AARSKRSRLS ASAAAVAVVA GEEAATNTAA SASPPRAGHH QRRLWVKDRS QAWWDQCNSP
201: DFPEAEFRRA FRMGRETFDM ICEALGSAVA KEDTMLRAAI PVRQRVAVCI WRLATGEPLR LVSKRFGLGI STCHKLVLEV CGAIKSVLMP RFLQWPDEAA
301: AGRFKEGFER SFGVPGVIGA MYTTHIPIIA PKISVAAYFN RRHTERNQKT SYSITLQGVV GPDRAFTDVC IGWPGSMPDD QVLEKSMLHQ RAAAGMMHDA
401: CLVGGASYPL MDWVLVPYTH QNLTWTQHAF NEKVGDIRNV AVEAFARLKT RWACLQKRTE VKLQDLPVVL GACCVLHNIC EMRREELEPE VPFALFDDDT
501: TPETPVRSET AKQERDSIAH NLLHRGFAGT TFF

Best Arabidopsis Sequence Match ( AT5G12010.1 )
(BLAST)

001: MKAAVFRNED GDEEEEEEEE EEVCNVFDGG EVESKRNNET KNLKGFFTSL LLMEEHEKQD QEARNAASRR EMSDFQSNYR KRARTMSDYY SDLNDYYADA
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL

Arabidopsis Description

AT5g12010/F14F18_180 [Source:UniProtKB/TrEMBL;Acc:Q9LYH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.