Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G475800.1 | Wheat | cytosol, nucleus, plastid | 95.45 | 93.63 |
| TraesCS1D01G449600.1 | Wheat | cytosol | 93.29 | 91.7 |
| Os05t0593000-01 | Rice | cytosol, nucleus, plastid | 59.74 | 65.25 |
| Zm00001d009746_P001 | Maize | cytosol, nucleus, plastid | 63.2 | 64.75 |
| Solyc08g062680.1.1 | Tomato | cytosol | 21.21 | 62.42 |
| PGSC0003DMT400000875 | Potato | cytosol | 51.3 | 53.14 |
| TraesCS3A01G209100.1 | Wheat | cytosol, nucleus, plastid | 61.04 | 52.91 |
| GSMUA_Achr6P00850_001 | Banana | nucleus | 43.72 | 52.88 |
| GSMUA_Achr5P22180_001 | Banana | nucleus | 37.45 | 52.42 |
| GSMUA_Achr6P04860_001 | Banana | cytosol, nucleus, plastid | 37.66 | 51.33 |
| VIT_11s0016g01810.t01 | Wine grape | nucleus | 54.98 | 49.9 |
| PGSC0003DMT400027828 | Potato | cytosol | 52.81 | 48.22 |
| Solyc12g009000.1.1 | Tomato | cytosol | 50.43 | 48.14 |
| Solyc07g040960.1.1 | Tomato | cytosol | 51.08 | 47.29 |
| TraesCS1A01G121900.1 | Wheat | cytosol, extracellular, plasma membrane | 46.75 | 45.19 |
| AT4G29780.1 | Thale cress | cytosol | 51.08 | 43.7 |
| TraesCS3A01G110000.1 | Wheat | cytosol | 46.32 | 41.39 |
| TraesCS3A01G356500.1 | Wheat | mitochondrion | 22.29 | 26.01 |
| TraesCS2A01G244500.1 | Wheat | nucleus | 20.78 | 21.01 |
| TraesCS2A01G518800.1 | Wheat | plastid | 19.26 | 20.14 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G441100.1 | EnsemblPlantsGene:TraesCS1A01G441100 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF113 | PFAM:PF13359 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:589791150..589792538
Molecular Weight (calculated)
50411.4 Da
IEP (calculated)
8.264
GRAVY (calculated)
-0.209
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNRRRKREP DDGGGAGGDE SKRDLDLRIT NILAEYRAPR PARRAFPLLE LNGRLLAEED EEGEAEVVSP LTAPAPALPV VVVDGRPSKR RVVAGGGGGG
101: GDEASPYQRR LWVKDRSSEW WELRSSPGYP EAEFLREFRM GRATFGMVCD ALGAAVAKED TALRAAIPVR QRVAVCVWRL ATGEPLRLVS KRFGIGISTC
201: HKLVLEVCAA IRSILMPRFL RWPDRGSAAA AAVKASFEAS SGVPDVVGAM YTTHIPIIAP KVHVASYFNR RHTERNQKTS YSITLQGVVG PDGSFTDVCI
301: GWPGSLADDQ VLDKSALQQR AAAGMMEGSW VVGGASYPLT DWCLVPYTHQ NLTWTQHAFN EKVADLRGVA VDAFSSLKSR WACLQKRTEV KLQDLPVVLG
401: ACCVLHNICE ARGEAMPPEL RVEVEDDLTV LDNPVRSDAA AKARDKIAHN LLHRGLAGTA FF
101: GDEASPYQRR LWVKDRSSEW WELRSSPGYP EAEFLREFRM GRATFGMVCD ALGAAVAKED TALRAAIPVR QRVAVCVWRL ATGEPLRLVS KRFGIGISTC
201: HKLVLEVCAA IRSILMPRFL RWPDRGSAAA AAVKASFEAS SGVPDVVGAM YTTHIPIIAP KVHVASYFNR RHTERNQKTS YSITLQGVVG PDGSFTDVCI
301: GWPGSLADDQ VLDKSALQQR AAAGMMEGSW VVGGASYPLT DWCLVPYTHQ NLTWTQHAFN EKVADLRGVA VDAFSSLKSR WACLQKRTEV KLQDLPVVLG
401: ACCVLHNICE ARGEAMPPEL RVEVEDDLTV LDNPVRSDAA AKARDKIAHN LLHRGLAGTA FF
001: MKAAVFRNED GDEEEEEEEE EEVCNVFDGG EVESKRNNET KNLKGFFTSL LLMEEHEKQD QEARNAASRR EMSDFQSNYR KRARTMSDYY SDLNDYYADA
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL
Arabidopsis Description
AT5g12010/F14F18_180 [Source:UniProtKB/TrEMBL;Acc:Q9LYH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.