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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:golgi, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G547100.1 Wheat mitochondrion 89.82 90.43
TraesCS2D01G520200.1 Wheat mitochondrion 86.88 87.47
Zm00001d026435_P001 Maize plastid 73.76 73.92
Os04t0644200-00 Rice mitochondrion 76.24 61.61
VIT_11s0118g00530.t01 Wine grape cytosol 19.91 45.6
PGSC0003DMT400078858 Potato nucleus 37.1 36.44
Solyc07g007360.1.1 Tomato cytosol, mitochondrion, nucleus 34.39 34.08
AT1G72275.1 Thale cress cytosol 28.73 29.95
CDX93109 Canola plastid 16.06 29.83
Bra013151.1-P Field mustard plastid 15.61 29.24
TraesCS3A01G356500.1 Wheat mitochondrion 20.59 22.98
TraesCS1A01G121900.1 Wheat cytosol, extracellular, plasma membrane 21.72 20.08
TraesCS1A01G441100.1 Wheat cytosol 20.14 19.26
TraesCS2A01G244500.1 Wheat nucleus 19.23 18.6
TraesCS3A01G110000.1 Wheat cytosol 20.81 17.8
TraesCS3A01G209100.1 Wheat cytosol, nucleus, plastid 19.91 16.51
Protein Annotations
EnsemblPlants:TraesCS2A01G518800.1EnsemblPlantsGene:TraesCS2A01G518800InterPro:HARBI1_domPANTHER:PTHR22930PANTHER:PTHR22930:SF87PFAM:PF13359
SEG:segMapMan:35.2::::
Description
No Description!
Coordinates
chr2A:+:742174760..742176088
Molecular Weight (calculated)
46768.6 Da
IEP (calculated)
9.000
GRAVY (calculated)
0.200
Length
442 amino acids
Sequence
(BLAST)
001: MVAAAAAAAR RKRSLLAPRS PARPRPPPPQ LTALLAQLAT SVSLALRFAS DRDLLLRPSQ ALALDPLLLA AARAVSRLLA LLPLHLQTIT LTSLSLSPPT
101: PPPSLPSSWF LRLVSASPAL PDSAWRDAFR MSRPAFYALL RSLALPDPAS PAAASSSLAL PADHKLGAAL YRLAHAAPAR AVARRFGLPS PAAAAQAFYE
201: VCRAVADRLA ALLDLAAPDR ISRAVPGFCA LSLPNCCGAL GYARFGAAAV TAQALVDAEG RFLDVSVGWD PAEAPPEVLP RTKLYASQSL VLANAPHGEL
301: IGGSVPRYFL APACCPLLPW LVTPYRDAGA TDGASKERIF NNVHAQGARL VRSAFGRVRA RWQLLEECWK GECQEALPYV VVAGCLLHNF LIKCGEPMPD
401: AAAAPVDAGA DAFADFEGEN DKEGERIRDV LAVHLSLVSR TQ
Best Arabidopsis Sequence Match ( AT1G72275.2 )
(BLAST)
001: MVAGKRKSDR NPTNVSDKLG LKDPLLRRLS SAAAVTNSFL QANDLFLSPS QTLRLESLIS SLPISPSPSS SSSAITTTTW FNRFLTSATE DEDDPRWCLY
101: FRMSKSTFFS LYSILSHSSL PSFAATIFRL AHGASYECLV HRFGFDSTSQ ASRSFFTVCK LINEKLSQQL DDPKPDFSPN LLPNCYGVVG FGRFEVKGKL
201: LGAKGSILVQ ALVDSNGRFV DISAGWPSTM KPEAIFRQTK LFSIAEEVLS GAPTKLGNGV LVPRYILGDS CLPLLPWLVT PYDLTSDEES FREEFNNVVH
301: TGLHSVEIAF AKVRARWRIL DKKWKPETIE FMPFVITTGC LLHNFLVNSG DDDDSVEECV NGCEAGDNGE MRKDDDKEEE TRSFEGEAYR ESKRIRDAIA
401: ENLSRVSSLR
Arabidopsis Description
LOW protein: nuclease-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AMV0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.