Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013151.1-P | Field mustard | plastid | 83.61 | 84.32 |
| AT1G72275.1 | Thale cress | cytosol | 52.52 | 29.48 |
| Zm00001d026435_P001 | Maize | plastid | 30.25 | 16.33 |
| TraesCS2A01G518800.1 | Wheat | plastid | 29.83 | 16.06 |
| TraesCS2D01G520200.1 | Wheat | mitochondrion | 29.41 | 15.95 |
| TraesCS2B01G547100.1 | Wheat | mitochondrion | 28.57 | 15.49 |
| PGSC0003DMT400078858 | Potato | nucleus | 26.05 | 13.78 |
| Solyc07g007360.1.1 | Tomato | cytosol, mitochondrion, nucleus | 25.63 | 13.68 |
| Os04t0644200-00 | Rice | mitochondrion | 29.83 | 12.98 |
| VIT_11s0118g00530.t01 | Wine grape | cytosol | 1.68 | 2.07 |
Protein Annotations
| EnsemblPlants:CDX93109 | EnsemblPlantsGene:GSBRNA2T00155022001 | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF87 | ProteinID:CDX93109 | ProteinID:CDX93109.1 |
| SEG:seg | UniParc:UPI0004EEA2AF | MapMan:35.2 | : | : | : |
Description
BnaA03g38310D
Coordinates
chrLK031874:+:1229330..1230618
Molecular Weight (calculated)
26315.2 Da
IEP (calculated)
10.374
GRAVY (calculated)
-0.366
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAGAGNSSA TMKSPASGSL AFVNSKKRKS HRNPTNKSEK LLPSDALLRR LSSAAAATRS FLQTNDLFLP PHQSLRIESL LSSLPIAPSH STSTSTTWFH
101: RFVNSAAEND DPRWHHCFRM SKPTFSKLLS ILSSSSDLPP LPSSSLAATL FRLAHNASYS SLAQRFGFDS VSDASRAFFT VCKLVHEKLG RLDDPKPDYS
201: PRLLPNCCGA LGFARRRICW VEQDQRCYCR EPEPRGFV
101: RFVNSAAEND DPRWHHCFRM SKPTFSKLLS ILSSSSDLPP LPSSSLAATL FRLAHNASYS SLAQRFGFDS VSDASRAFFT VCKLVHEKLG RLDDPKPDYS
201: PRLLPNCCGA LGFARRRICW VEQDQRCYCR EPEPRGFV
001: MVAGKRKSDR NPTNVSDKLG LKDPLLRRLS SAAAVTNSFL QANDLFLSPS QTLRLESLIS SLPISPSPSS SSSAITTTTW FNRFLTSATE DEDDPRWCLY
101: FRMSKSTFFS LYSILSHSSL PSFAATIFRL AHGASYECLV HRFGFDSTSQ ASRSFFTVCK LINEKLSQQL DDPKPDFSPN LLPNCYGVVG FGRFEVKGKL
201: LGAKGSILVQ ALVDSNGRFV DISAGWPSTM KPEAIFRQTK LFSIAEEVLS GAPTKLGNGV LVPRYILGDS CLPLLPWLVT PYDLTSDEES FREEFNNVVH
301: TGLHSVEIAF AKVRARWRIL DKKWKPETIE FMPFVITTGC LLHNFLVNSG DDDDSVEECV NGCEAGDNGE MRKDDDKEEE TRSFEGEAYR ESKRIRDAIA
401: ENLSRVSSLR
101: FRMSKSTFFS LYSILSHSSL PSFAATIFRL AHGASYECLV HRFGFDSTSQ ASRSFFTVCK LINEKLSQQL DDPKPDFSPN LLPNCYGVVG FGRFEVKGKL
201: LGAKGSILVQ ALVDSNGRFV DISAGWPSTM KPEAIFRQTK LFSIAEEVLS GAPTKLGNGV LVPRYILGDS CLPLLPWLVT PYDLTSDEES FREEFNNVVH
301: TGLHSVEIAF AKVRARWRIL DKKWKPETIE FMPFVITTGC LLHNFLVNSG DDDDSVEECV NGCEAGDNGE MRKDDDKEEE TRSFEGEAYR ESKRIRDAIA
401: ENLSRVSSLR
Arabidopsis Description
LOW protein: nuclease-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AMV0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.