Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G547100.1 | Wheat | mitochondrion | 89.52 | 89.52 |
| TraesCS2A01G518800.1 | Wheat | plastid | 87.47 | 86.88 |
| Zm00001d026435_P001 | Maize | plastid | 74.49 | 74.15 |
| Os04t0644200-00 | Rice | mitochondrion | 76.77 | 61.61 |
| VIT_11s0118g00530.t01 | Wine grape | cytosol | 19.36 | 44.04 |
| PGSC0003DMT400078858 | Potato | nucleus | 36.22 | 35.33 |
| Solyc07g007360.1.1 | Tomato | cytosol, mitochondrion, nucleus | 33.94 | 33.41 |
| AT1G72275.1 | Thale cress | cytosol | 28.47 | 29.48 |
| CDX93109 | Canola | plastid | 15.95 | 29.41 |
| Bra013151.1-P | Field mustard | plastid | 15.49 | 28.81 |
| TraesCS7D01G124800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 20.96 | 24.02 |
| TraesCS3D01G350500.1 | Wheat | mitochondrion | 21.18 | 23.48 |
| TraesCS1D01G122700.1 | Wheat | cytosol, extracellular, peroxisome | 22.32 | 20.5 |
| TraesCS1D01G449600.1 | Wheat | cytosol | 19.82 | 18.51 |
| TraesCS3D01G318900.1 | Wheat | cytosol | 18.45 | 18.37 |
| TraesCS3D01G212000.1 | Wheat | cytosol, mitochondrion, nucleus | 20.27 | 16.73 |
| TraesCS3D01G111700.2 | Wheat | cytosol | 19.36 | 15.86 |
| TraesCS3D01G111900.1 | Wheat | cytosol | 18.45 | 14.94 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G520200.1 | EnsemblPlantsGene:TraesCS2D01G520200 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF87 | PFAM:PF13359 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:609492585..609493904
Molecular Weight (calculated)
46581.4 Da
IEP (calculated)
9.314
GRAVY (calculated)
0.175
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAAAAARRK RSRLAPRSPP ATRPRAPPPQ LTALLAQLAT SVSLALRFAS DRDLLLRPSQ ALALDPLLLA AARAVSRLLA LLPLHLQTIT LTSLSLSPPT
101: PPPSLPSSWF LRLVSASPAL PDSAWRDAFR MSRPAFYALL RSLALPDPAA ASSSLALPAD HKLGAALYRL AHAAPARAVA RRFGLPSPAA AAQAFYEVCR
201: AVADRLAALL DLAAPDRISR AVPGFCALSL PNCCGALGYA RFGGAAVTAQ ALVDAEGRFL DVSVGWDPAE APPEVLPRTK LYTSQSLVLA NAPHGELIGG
301: SVPRYFLAPA CCPLLPWLVT PYRDAGATDG ASKERIFNNV HAQGARLVRS AFGRVRARWL LLEEPWKGEC QEALPYVVVA GCLLHNFLIK CGEPMPDAAA
401: APVDAGADAF ADFEGENDKE GERIRDVLAV HLSLVSRTQ
101: PPPSLPSSWF LRLVSASPAL PDSAWRDAFR MSRPAFYALL RSLALPDPAA ASSSLALPAD HKLGAALYRL AHAAPARAVA RRFGLPSPAA AAQAFYEVCR
201: AVADRLAALL DLAAPDRISR AVPGFCALSL PNCCGALGYA RFGGAAVTAQ ALVDAEGRFL DVSVGWDPAE APPEVLPRTK LYTSQSLVLA NAPHGELIGG
301: SVPRYFLAPA CCPLLPWLVT PYRDAGATDG ASKERIFNNV HAQGARLVRS AFGRVRARWL LLEEPWKGEC QEALPYVVVA GCLLHNFLIK CGEPMPDAAA
401: APVDAGADAF ADFEGENDKE GERIRDVLAV HLSLVSRTQ
001: MVAGKRKSDR NPTNVSDKLG LKDPLLRRLS SAAAVTNSFL QANDLFLSPS QTLRLESLIS SLPISPSPSS SSSAITTTTW FNRFLTSATE DEDDPRWCLY
101: FRMSKSTFFS LYSILSHSSL PSFAATIFRL AHGASYECLV HRFGFDSTSQ ASRSFFTVCK LINEKLSQQL DDPKPDFSPN LLPNCYGVVG FGRFEVKGKL
201: LGAKGSILVQ ALVDSNGRFV DISAGWPSTM KPEAIFRQTK LFSIAEEVLS GAPTKLGNGV LVPRYILGDS CLPLLPWLVT PYDLTSDEES FREEFNNVVH
301: TGLHSVEIAF AKVRARWRIL DKKWKPETIE FMPFVITTGC LLHNFLVNSG DDDDSVEECV NGCEAGDNGE MRKDDDKEEE TRSFEGEAYR ESKRIRDAIA
401: ENLSRVSSLR
101: FRMSKSTFFS LYSILSHSSL PSFAATIFRL AHGASYECLV HRFGFDSTSQ ASRSFFTVCK LINEKLSQQL DDPKPDFSPN LLPNCYGVVG FGRFEVKGKL
201: LGAKGSILVQ ALVDSNGRFV DISAGWPSTM KPEAIFRQTK LFSIAEEVLS GAPTKLGNGV LVPRYILGDS CLPLLPWLVT PYDLTSDEES FREEFNNVVH
301: TGLHSVEIAF AKVRARWRIL DKKWKPETIE FMPFVITTGC LLHNFLVNSG DDDDSVEECV NGCEAGDNGE MRKDDDKEEE TRSFEGEAYR ESKRIRDAIA
401: ENLSRVSSLR
Arabidopsis Description
LOW protein: nuclease-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AMV0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.