Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G110000.1 | Wheat | cytosol | 75.56 | 78.34 |
| TraesCS3D01G111900.1 | Wheat | cytosol | 62.87 | 62.18 |
| TraesCS1D01G449600.1 | Wheat | cytosol | 37.5 | 42.77 |
| Solyc08g062680.1.1 | Tomato | cytosol | 12.5 | 42.68 |
| TraesCS1D01G122700.1 | Wheat | cytosol, extracellular, peroxisome | 37.13 | 41.63 |
| GSMUA_Achr5P22180_001 | Banana | nucleus | 25.37 | 41.21 |
| PGSC0003DMT400000875 | Potato | cytosol | 33.77 | 40.58 |
| GSMUA_Achr6P00850_001 | Banana | nucleus | 27.8 | 39.01 |
| GSMUA_Achr6P04860_001 | Banana | cytosol, nucleus, plastid | 24.25 | 38.35 |
| Solyc12g009000.1.1 | Tomato | cytosol | 33.96 | 37.6 |
| TraesCS3D01G212000.1 | Wheat | cytosol, mitochondrion, nucleus | 36.94 | 37.22 |
| TraesCS3D01G318900.1 | Wheat | cytosol | 30.41 | 36.96 |
| VIT_11s0016g01810.t01 | Wine grape | nucleus | 34.33 | 36.15 |
| Solyc07g040960.1.1 | Tomato | cytosol | 32.84 | 35.27 |
| PGSC0003DMT400027828 | Potato | cytosol | 33.21 | 35.18 |
| AT4G29780.1 | Thale cress | cytosol | 33.4 | 33.15 |
| TraesCS3D01G350500.1 | Wheat | mitochondrion | 18.47 | 25.0 |
| TraesCS2D01G520200.1 | Wheat | mitochondrion | 15.86 | 19.36 |
| TraesCS7D01G124800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 12.87 | 18.02 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G111700.2 | EnsemblPlantsGene:TraesCS3D01G111700 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF113 | PFAM:PF13359 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:66138198..66140200
Molecular Weight (calculated)
57920.7 Da
IEP (calculated)
6.785
GRAVY (calculated)
-0.234
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRDQPYVGS QHYSAQNMAD GGDLSYLDYY FQQDAASESV PAPVNPQGSK KRGASAMEVE APQGLGVVNL WNEMGAGDQQ GFKRQNSLWE SMDTGGGLAL
101: HVVESSVGFG VPQVQGMVNL GAQWTGGAPS EARGSKRQRS PSGSIETASG GSYEDGGSEN VDESVVLATG TGEKGGGRRL WKKDRHNEWW DTVSSSGYPA
201: ADFRHHFRMS PYTFQVLCEQ LATAVRKEDT ALRAAIPVQK RVAVCVWRLA TGEPLRKVAD RFAIGVSTCH KLVLDVCGAI QATVVPNVIQ WSAAAAMATN
301: AAKFEALSGI PGIIGAVYTT HVAIIAPKHH VINYLNPRAT ARKSKTCYSI TLQASLDTDG TFTDVYVCPG TMTDAQTLLL WSMNKPKLIG ETLGQGMRLV
401: GGAGYPLTDW MLVPYSHQNL TLTQHEFNKR VANARAVAVS AFQRLQGRWA CLQRRTEVKV DDLSIMLSAC CALHNICERS GEPFDLQLLQ GLELELDDDN
501: MVANDPVPSP AAGQMRDTIA HNMLHHATVA GAGSFY
101: HVVESSVGFG VPQVQGMVNL GAQWTGGAPS EARGSKRQRS PSGSIETASG GSYEDGGSEN VDESVVLATG TGEKGGGRRL WKKDRHNEWW DTVSSSGYPA
201: ADFRHHFRMS PYTFQVLCEQ LATAVRKEDT ALRAAIPVQK RVAVCVWRLA TGEPLRKVAD RFAIGVSTCH KLVLDVCGAI QATVVPNVIQ WSAAAAMATN
301: AAKFEALSGI PGIIGAVYTT HVAIIAPKHH VINYLNPRAT ARKSKTCYSI TLQASLDTDG TFTDVYVCPG TMTDAQTLLL WSMNKPKLIG ETLGQGMRLV
401: GGAGYPLTDW MLVPYSHQNL TLTQHEFNKR VANARAVAVS AFQRLQGRWA CLQRRTEVKV DDLSIMLSAC CALHNICERS GEPFDLQLLQ GLELELDDDN
501: MVANDPVPSP AAGQMRDTIA HNMLHHATVA GAGSFY
001: MEISSFPFPY LQDDECSHFL GLFQDMDSSP STFGLEGFNS NDNNTNQKKR PRKDDEGGGG GGGGTEVLGA VNGNNKAAFG DILATLLLLD EEAKQQQEQW
101: DFEFIKEKSL LEANHKKKVK TMDGYYNQMQ DHYSAAGETD GSRSKRARKT AVAAVVSAVA SGADTTGLAA PVPTADIASG SGSGPSHRRL WVKERTTDWW
201: DRVSRPDFPE DEFRREFRMS KSTFNLICEE LDTTVTKKNT MLRDAIPAPK RVGVCVWRLA TGAPLRHVSE RFGLGISTCH KLVIEVCRAI YDVLMPKYLL
301: WPSDSEINST KAKFESVHKI PNVVGSIYTT HIPIIAPKVH VAAYFNKRHT ERNQKTSYSI TVQGVVNADG IFTDVCIGNP GSLTDDQILE KSSLSRQRAA
401: RGMLRDSWIV GNSGFPLTDY LLVPYTRQNL TWTQHAFNES IGEIQGIATA AFERLKGRWA CLQKRTEVKL QDLPYVLGAC CVLHNICEMR KEEMLPELKF
501: EVFDDVAVPE NNIRSASAVN TRDHISHNLL HRGLAGTRTL
101: DFEFIKEKSL LEANHKKKVK TMDGYYNQMQ DHYSAAGETD GSRSKRARKT AVAAVVSAVA SGADTTGLAA PVPTADIASG SGSGPSHRRL WVKERTTDWW
201: DRVSRPDFPE DEFRREFRMS KSTFNLICEE LDTTVTKKNT MLRDAIPAPK RVGVCVWRLA TGAPLRHVSE RFGLGISTCH KLVIEVCRAI YDVLMPKYLL
301: WPSDSEINST KAKFESVHKI PNVVGSIYTT HIPIIAPKVH VAAYFNKRHT ERNQKTSYSI TVQGVVNADG IFTDVCIGNP GSLTDDQILE KSSLSRQRAA
401: RGMLRDSWIV GNSGFPLTDY LLVPYTRQNL TWTQHAFNES IGEIQGIATA AFERLKGRWA CLQKRTEVKL QDLPYVLGAC CVLHNICEMR KEEMLPELKF
501: EVFDDVAVPE NNIRSASAVN TRDHISHNLL HRGLAGTRTL
Arabidopsis Description
Nuclease [Source:UniProtKB/TrEMBL;Acc:Q84J48]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.