Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g062680.1.1 | Tomato | cytosol | 16.55 | 46.5 |
| TraesCS1D01G449600.1 | Wheat | cytosol | 45.35 | 42.55 |
| GSMUA_Achr6P00850_001 | Banana | nucleus | 35.6 | 41.1 |
| PGSC0003DMT400000875 | Potato | cytosol | 40.82 | 40.36 |
| GSMUA_Achr5P22180_001 | Banana | nucleus | 29.25 | 39.09 |
| GSMUA_Achr6P04860_001 | Banana | cytosol, nucleus, plastid | 29.71 | 38.64 |
| PGSC0003DMT400027828 | Potato | cytosol | 43.76 | 38.14 |
| Solyc07g040960.1.1 | Tomato | cytosol | 42.86 | 37.88 |
| Solyc12g009000.1.1 | Tomato | cytosol | 41.04 | 37.4 |
| TraesCS3D01G212000.1 | Wheat | cytosol, mitochondrion, nucleus | 44.9 | 37.22 |
| VIT_11s0016g01810.t01 | Wine grape | nucleus | 42.18 | 36.54 |
| TraesCS1D01G122700.1 | Wheat | cytosol, extracellular, peroxisome | 34.47 | 31.8 |
| AT4G29780.1 | Thale cress | cytosol | 37.64 | 30.74 |
| TraesCS3D01G111700.2 | Wheat | cytosol | 36.96 | 30.41 |
| TraesCS3D01G111900.1 | Wheat | cytosol | 36.05 | 29.34 |
| TraesCS3D01G350500.1 | Wheat | mitochondrion | 20.18 | 22.47 |
| TraesCS2D01G520200.1 | Wheat | mitochondrion | 18.37 | 18.45 |
| TraesCS7D01G124800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 15.87 | 18.28 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G318900.1 | EnsemblPlantsGene:TraesCS3D01G318900 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF113 | PFAM:PF13359 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:432544962..432546287
Molecular Weight (calculated)
49613.1 Da
IEP (calculated)
7.093
GRAVY (calculated)
-0.361
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSHQREHRS SDEPKIGDGS GDRDDTSKKR CITNELPSFN STRHDLHLLE FKSGNQKNGD EDDAEVEIQL TQVDGKETGN PSKSPTRSLE LGGDTSPHQQ
101: GQLWEKDQSG TWWKQCISPD YPEAKFRSHF RMGWGTFDMI CDALASSIAK KDTPLHPAIP VRQRVAICVW RLASGEPLHV VSQRFGIALS TRLKIFHEVC
201: AAIWHILMPR FIQWPDQTIA LKDNFKAISG IPDVVGAIYT THVQIIQPIL WASDYLDWGP YNYNRNSTYL STTIQGVVDP FGTFTDVCIG CPGALRDDEI
301: VCISGLQQRG RPQVMPSSWV VGGSSYPLME WLLVPYPHQN LTREQHSFNK KVMKVHRVAV DAFARLRGRW AFLQKRIGVN ISNVSIVIGA CCVLHNICEV
401: KGEVMSPELR CDVIDFETVP ENLVHSESAS KARDKIAHTL F
101: GQLWEKDQSG TWWKQCISPD YPEAKFRSHF RMGWGTFDMI CDALASSIAK KDTPLHPAIP VRQRVAICVW RLASGEPLHV VSQRFGIALS TRLKIFHEVC
201: AAIWHILMPR FIQWPDQTIA LKDNFKAISG IPDVVGAIYT THVQIIQPIL WASDYLDWGP YNYNRNSTYL STTIQGVVDP FGTFTDVCIG CPGALRDDEI
301: VCISGLQQRG RPQVMPSSWV VGGSSYPLME WLLVPYPHQN LTREQHSFNK KVMKVHRVAV DAFARLRGRW AFLQKRIGVN ISNVSIVIGA CCVLHNICEV
401: KGEVMSPELR CDVIDFETVP ENLVHSESAS KARDKIAHTL F
001: MEEAFMAMLS HLLHLQNSLD PTSTLFSSAS TSSQSSTTPS SLLSTSSAAP LLFFTLASLL SFLAVNRSST ESSSSSESPS PSPPPPLADG DYSVAAFRAL
101: TTDHIWSLDA PLRDARWRSL YGLSYPVFIT VVDKLKPFIT ASNLSLPADY AVAMVLSRLA HGCSAKTLAS RYSLDPYLIS KITNMVTRLL ATKLYPEFIK
201: IPVGKRRLIE TTQGFEELTS LPNICGAIDS TPVKLRRRTK LNPRNIYGCK YGYDAVLLQV VADHKKIFWD VCVKAPGGED DSSHFRDSLL YKRLTSGDIV
301: WEKVINIRGH HVRPYIVGDW CYPLLSFLMT PFSPNGSGTP PENLFDGMLM KGRSVVVEAI GLLKARWKIL QSLNVGVNHA PQTIVACCVL HNLCQIAREP
401: EPEIWKDPDE AGTPARVLES ERQFYYYGES LRQALAEDLH QRLSSR
101: TTDHIWSLDA PLRDARWRSL YGLSYPVFIT VVDKLKPFIT ASNLSLPADY AVAMVLSRLA HGCSAKTLAS RYSLDPYLIS KITNMVTRLL ATKLYPEFIK
201: IPVGKRRLIE TTQGFEELTS LPNICGAIDS TPVKLRRRTK LNPRNIYGCK YGYDAVLLQV VADHKKIFWD VCVKAPGGED DSSHFRDSLL YKRLTSGDIV
301: WEKVINIRGH HVRPYIVGDW CYPLLSFLMT PFSPNGSGTP PENLFDGMLM KGRSVVVEAI GLLKARWKIL QSLNVGVNHA PQTIVACCVL HNLCQIAREP
401: EPEIWKDPDE AGTPARVLES ERQFYYYGES LRQALAEDLH QRLSSR
Arabidopsis Description
At3g19120/MVI11_3 [Source:UniProtKB/TrEMBL;Acc:Q9LJL8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.