Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G129100.1 | Wheat | cytosol | 63.65 | 65.09 |
| TraesCS3D01G111700.2 | Wheat | cytosol | 62.18 | 62.87 |
| TraesCS3A01G110000.1 | Wheat | cytosol | 59.41 | 62.28 |
| TraesCS1D01G449600.1 | Wheat | cytosol | 39.48 | 45.53 |
| Solyc08g062680.1.1 | Tomato | cytosol | 12.92 | 44.59 |
| GSMUA_Achr5P22180_001 | Banana | nucleus | 24.91 | 40.91 |
| GSMUA_Achr6P00850_001 | Banana | nucleus | 28.78 | 40.84 |
| TraesCS1D01G122700.1 | Wheat | cytosol, extracellular, peroxisome | 35.98 | 40.8 |
| PGSC0003DMT400000875 | Potato | cytosol | 33.03 | 40.13 |
| GSMUA_Achr6P04860_001 | Banana | cytosol, nucleus, plastid | 25.09 | 40.12 |
| TraesCS3D01G212000.1 | Wheat | cytosol, mitochondrion, nucleus | 38.19 | 38.91 |
| VIT_11s0016g01810.t01 | Wine grape | nucleus | 35.98 | 38.31 |
| Solyc12g009000.1.1 | Tomato | cytosol | 33.03 | 36.98 |
| TraesCS3D01G318900.1 | Wheat | cytosol | 29.34 | 36.05 |
| Solyc07g040960.1.1 | Tomato | cytosol | 32.47 | 35.27 |
| PGSC0003DMT400027828 | Potato | cytosol | 32.84 | 35.18 |
| AT4G29780.1 | Thale cress | cytosol | 34.13 | 34.26 |
| TraesCS3D01G350500.1 | Wheat | mitochondrion | 18.08 | 24.75 |
| TraesCS2D01G520200.1 | Wheat | mitochondrion | 14.94 | 18.45 |
| TraesCS7D01G124800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 12.92 | 18.28 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G111900.1 | EnsemblPlantsGene:TraesCS3D01G111900 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF113 | PFAM:PF13359 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:66309763..66311391
Molecular Weight (calculated)
58822.9 Da
IEP (calculated)
6.879
GRAVY (calculated)
-0.223
Length
542 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRNQPYVGS HHYSTQTMAD GGDLSYLDYY FEQDAVSESA PAPVNPQGSK KRGASAMEVE APQGQGVVNL WNEMGAREPG FKRQNSLWES MDTSGGLALH
101: VVESSVGFGV PHVQGMVNLG AEWMGGVPSV SGARGSKRQR SPSGSMETAS GVDSNEDGGS EIVDEYVVLA TVTREKGVGG GGRRLWKKDR HSAWWDTVSS
201: SGYPAADFRH HFRMSPYTFQ VLCEQLAAAV RKEDTALRAA IPVQKRVAVC VWRLATGEPL RKVADRFAIG VSTCHKLVLD VCAAIQATVV PNVIQWPDAA
301: TMATNAAKFE ALSGIPGIIG AVHTTHVAII APKHHVINYL NPRATARKSK TCYSITLQAS VDADGTFTDI CVSPGAMADE QTLLLWSMNK PKLTEETLGQ
401: GMRVVGGAGY PLTDWMLVPY SHQNLTWTQH EFNQRLAKAR AVAVTSFQRL KARWACLQRR TEVKVDDLSV MLGACCTLHN ICEHSGEPFD LQLLHGVELD
501: LDDDNHMVAN DPVPSPAAAQ MRDTIAHNML HHATVAGAGS FY
101: VVESSVGFGV PHVQGMVNLG AEWMGGVPSV SGARGSKRQR SPSGSMETAS GVDSNEDGGS EIVDEYVVLA TVTREKGVGG GGRRLWKKDR HSAWWDTVSS
201: SGYPAADFRH HFRMSPYTFQ VLCEQLAAAV RKEDTALRAA IPVQKRVAVC VWRLATGEPL RKVADRFAIG VSTCHKLVLD VCAAIQATVV PNVIQWPDAA
301: TMATNAAKFE ALSGIPGIIG AVHTTHVAII APKHHVINYL NPRATARKSK TCYSITLQAS VDADGTFTDI CVSPGAMADE QTLLLWSMNK PKLTEETLGQ
401: GMRVVGGAGY PLTDWMLVPY SHQNLTWTQH EFNQRLAKAR AVAVTSFQRL KARWACLQRR TEVKVDDLSV MLGACCTLHN ICEHSGEPFD LQLLHGVELD
501: LDDDNHMVAN DPVPSPAAAQ MRDTIAHNML HHATVAGAGS FY
001: MEISSFPFPY LQDDECSHFL GLFQDMDSSP STFGLEGFNS NDNNTNQKKR PRKDDEGGGG GGGGTEVLGA VNGNNKAAFG DILATLLLLD EEAKQQQEQW
101: DFEFIKEKSL LEANHKKKVK TMDGYYNQMQ DHYSAAGETD GSRSKRARKT AVAAVVSAVA SGADTTGLAA PVPTADIASG SGSGPSHRRL WVKERTTDWW
201: DRVSRPDFPE DEFRREFRMS KSTFNLICEE LDTTVTKKNT MLRDAIPAPK RVGVCVWRLA TGAPLRHVSE RFGLGISTCH KLVIEVCRAI YDVLMPKYLL
301: WPSDSEINST KAKFESVHKI PNVVGSIYTT HIPIIAPKVH VAAYFNKRHT ERNQKTSYSI TVQGVVNADG IFTDVCIGNP GSLTDDQILE KSSLSRQRAA
401: RGMLRDSWIV GNSGFPLTDY LLVPYTRQNL TWTQHAFNES IGEIQGIATA AFERLKGRWA CLQKRTEVKL QDLPYVLGAC CVLHNICEMR KEEMLPELKF
501: EVFDDVAVPE NNIRSASAVN TRDHISHNLL HRGLAGTRTL
101: DFEFIKEKSL LEANHKKKVK TMDGYYNQMQ DHYSAAGETD GSRSKRARKT AVAAVVSAVA SGADTTGLAA PVPTADIASG SGSGPSHRRL WVKERTTDWW
201: DRVSRPDFPE DEFRREFRMS KSTFNLICEE LDTTVTKKNT MLRDAIPAPK RVGVCVWRLA TGAPLRHVSE RFGLGISTCH KLVIEVCRAI YDVLMPKYLL
301: WPSDSEINST KAKFESVHKI PNVVGSIYTT HIPIIAPKVH VAAYFNKRHT ERNQKTSYSI TVQGVVNADG IFTDVCIGNP GSLTDDQILE KSSLSRQRAA
401: RGMLRDSWIV GNSGFPLTDY LLVPYTRQNL TWTQHAFNES IGEIQGIATA AFERLKGRWA CLQKRTEVKL QDLPYVLGAC CVLHNICEMR KEEMLPELKF
501: EVFDDVAVPE NNIRSASAVN TRDHISHNLL HRGLAGTRTL
Arabidopsis Description
Nuclease [Source:UniProtKB/TrEMBL;Acc:Q84J48]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.