Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G356500.1 | Wheat | mitochondrion | 96.72 | 96.72 |
| TraesCS3B01G389300.1 | Wheat | mitochondrion | 93.69 | 93.92 |
| Os01t0838900-01 | Rice | cytosol, mitochondrion | 81.31 | 81.31 |
| Zm00001d005463_P001 | Maize | cytosol | 30.05 | 72.12 |
| Zm00001d038377_P002 | Maize | nucleus | 60.1 | 53.24 |
| VIT_06s0004g04160.t01 | Wine grape | nucleus | 51.26 | 52.86 |
| Solyc11g073090.1.1 | Tomato | cytosol | 40.91 | 49.24 |
| AT3G55350.1 | Thale cress | nucleus | 47.47 | 46.31 |
| Bra007153.1-P | Field mustard | nucleus | 46.72 | 45.68 |
| Solyc05g054670.2.1 | Tomato | cytosol | 44.19 | 44.3 |
| VIT_13s0019g00460.t01 | Wine grape | plastid | 38.38 | 39.38 |
| TraesCS1D01G122700.1 | Wheat | cytosol, extracellular, peroxisome | 27.78 | 23.01 |
| TraesCS1D01G449600.1 | Wheat | cytosol | 26.26 | 22.13 |
| TraesCS2D01G520200.1 | Wheat | mitochondrion | 23.48 | 21.18 |
| TraesCS3D01G318900.1 | Wheat | cytosol | 22.47 | 20.18 |
| TraesCS3D01G212000.1 | Wheat | cytosol, mitochondrion, nucleus | 26.52 | 19.74 |
| TraesCS7D01G124800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 18.43 | 19.06 |
| TraesCS3D01G111700.2 | Wheat | cytosol | 25.0 | 18.47 |
| TraesCS3D01G111900.1 | Wheat | cytosol | 24.75 | 18.08 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G350500.1 | EnsemblPlantsGene:TraesCS3D01G350500 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF111 | PFAM:PF13359 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:461665678..461668681
Molecular Weight (calculated)
44596.5 Da
IEP (calculated)
7.894
GRAVY (calculated)
-0.383
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPLRGAKRR KRHPEKALPA GVMAPLPPPD AADWWDSFSR RLAAGHYSKD CQNFESVFKM SRKTFDYICT LITGDFSRKT QGFRNFRFGD KTILALEDQV
101: AVALLRLTTG ESLLSIGNRF GMNHSAISNI TWKFIESLED HAISHLKWPD PEEMATIKAK FEKLQGLPNC CGAIDTTHIL MCSSAQPNSN VWLDCENRNS
201: MVLQAVVDPD MRFRDVVSGW PGSMDDSCIL RTSGFYKLCE KGGRLDGQME LPGEPAGSVV REYIIGDTGY PLLPWLMTPY QERDLSPAKA AFNKQHAAAR
301: MVVQGAMARL KERWQVLKGE LWRPDKHRLP RIIYACCLLT NIMIDLGDTH RERAPASHDH DDGYYQQFSN VADDGAVAQR DVLCQFVSRL GSKLPE
101: AVALLRLTTG ESLLSIGNRF GMNHSAISNI TWKFIESLED HAISHLKWPD PEEMATIKAK FEKLQGLPNC CGAIDTTHIL MCSSAQPNSN VWLDCENRNS
201: MVLQAVVDPD MRFRDVVSGW PGSMDDSCIL RTSGFYKLCE KGGRLDGQME LPGEPAGSVV REYIIGDTGY PLLPWLMTPY QERDLSPAKA AFNKQHAAAR
301: MVVQGAMARL KERWQVLKGE LWRPDKHRLP RIIYACCLLT NIMIDLGDTH RERAPASHDH DDGYYQQFSN VADDGAVAQR DVLCQFVSRL GSKLPE
001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
Arabidopsis Description
Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.