Factsheet for Zm00001d038377_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005463_P001	Maize	cytosol	34.0	92.12
Os01t0838900-01	Rice	cytosol, mitochondrion	53.69	60.61
TraesCS3D01G350500.1	Wheat	mitochondrion	53.24	60.1
TraesCS3B01G389300.1	Wheat	mitochondrion	53.02	60.0
TraesCS3A01G356500.1	Wheat	mitochondrion	52.13	58.84
Solyc11g073090.1.1	Tomato	cytosol	36.02	48.94
Zm00001d048620_P001	Maize	mitochondrion	40.94	46.92
VIT_06s0004g04160.t01	Wine grape	nucleus	40.27	46.88
Zm00001d006850_P001	Maize	cytosol	20.81	44.93
AT3G55350.1	Thale cress	nucleus	40.49	44.58
Bra007153.1-P	Field mustard	nucleus	39.82	43.95
Solyc05g054670.2.1	Tomato	cytosol	36.47	41.27
VIT_13s0019g00460.t01	Wine grape	plastid	33.56	38.86
Zm00001d018916_P001	Maize	cytosol	32.21	35.56
Zm00001d009746_P001	Maize	cytosol, nucleus, plastid	22.6	22.39
Zm00001d026435_P001	Maize	plastid	21.25	21.54
Zm00001d045208_P001	Maize	endoplasmic reticulum, vacuole	17.9	20.94
Zm00001d039524_P001	Maize	cytosol	21.92	20.76
Zm00001d010356_P001	Maize	nucleus	22.15	20.75
Zm00001d010344_P001	Maize	cytosol	21.03	19.79
Zm00001d044300_P001	Maize	cytosol	22.15	17.43
Zm00001d010347_P001	Maize	nucleus, plastid	11.63	16.83

Protein Annotations

EnsemblPlants:Zm00001d038377_P002	EnsemblPlants:Zm00001d038377_T002	EnsemblPlantsGene:Zm00001d038377	EntrezGene:100194168	InterPro:HARBI1_dom	PANTHER:PTHR22930
PANTHER:PTHR22930:SF111	PFAM:PF13359	ProteinID:AQK86480.1	SEG:seg	UniParc:UPI0008429057	UniProt:A0A1D6M5W5
MapMan:35.1	:	:	:	:	:

Description

PIF / Ping-Pong family of plant transposases

Coordinates

chr6:+:155916704..155920144

Molecular Weight (calculated)

50284.7 Da

IEP (calculated)

9.027

GRAVY (calculated)

-0.358

Length

447 amino acids

Sequence
(BLAST)

001: MAPVRGAKKR KRPEKPAPAP TPGLPLPPLP DGSDWWGVFY RRVAGRLSSP YPPSLPASLC SLECALPCSF RRCKLDQRGM VGKYLVLGHS PFPREHQNME
101: SVLKMSRRTF DYICSLVKKD LTTKTYGFRN FRFGDKKVLG VEDQVAVALM RLTTGESLQN IGMWFGMNHS AISNITWRFI ESVEERAICH LKWPSPEEMA
201: TIKTRFDKVY GLPNCCGAID TTHILMCSSA QPNSKVWLDN ENKNSMVLQA VVDADLRFRD VVSGWPGSMD DTCILRTSGL YRLCEKGLRL GGQMELPGGS
301: AVREYLVGDA SYPLLPWLMT PYREHGLQAA KVEFNKRHTA AAAVVQTALA TLKGRWRVIQ GELWRPDKHR LPRIIFVCCL ITNIIIDMEG TPSRDELVSG
401: NHDLGYKQQF SDAADDNAIK QRDDLSRHVD NAIKRRDDLS HHVTAGE

Best Arabidopsis Sequence Match ( AT3G55350.1 )
(BLAST)

001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA

Arabidopsis Description

Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.