Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 3
- golgi 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G124800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 63.35 | 63.19 |
| TraesCS7B01G026400.1 | Wheat | endoplasmic reticulum, plasma membrane | 63.35 | 62.05 |
| Os06t0164500-00 | Rice | mitochondrion | 60.73 | 53.21 |
| GSMUA_Achr9P00980_001 | Banana | endoplasmic reticulum, plasma membrane | 37.7 | 34.45 |
| VIT_03s0063g00150.t01 | Wine grape | extracellular, vacuole | 33.77 | 28.41 |
| PGSC0003DMT400066745 | Potato | endoplasmic reticulum, plasma membrane | 29.06 | 26.18 |
| Solyc01g107920.2.1 | Tomato | extracellular, plasma membrane | 28.01 | 25.85 |
| Zm00001d026435_P001 | Maize | plastid | 23.3 | 20.18 |
| Zm00001d006850_P001 | Maize | cytosol | 10.21 | 18.84 |
| Zm00001d018916_P001 | Maize | cytosol | 19.37 | 18.27 |
| Zm00001d038377_P002 | Maize | nucleus | 20.94 | 17.9 |
| Zm00001d039524_P001 | Maize | cytosol | 21.47 | 17.37 |
| Zm00001d010356_P001 | Maize | nucleus | 20.94 | 16.77 |
| Zm00001d010344_P001 | Maize | cytosol | 20.68 | 16.63 |
| Zm00001d048620_P001 | Maize | mitochondrion | 16.23 | 15.9 |
| Zm00001d009746_P001 | Maize | cytosol, nucleus, plastid | 18.59 | 15.74 |
| Zm00001d005463_P001 | Maize | cytosol | 6.28 | 14.55 |
| Zm00001d010347_P001 | Maize | nucleus, plastid | 11.26 | 13.92 |
| Zm00001d044300_P001 | Maize | cytosol | 20.16 | 13.56 |
Protein Annotations
| EMBL:BT065403 | EMBL:EU977057 | EnsemblPlants:Zm00001d045208_P001 | EnsemblPlants:Zm00001d045208_T001 | EnsemblPlantsGene:Zm00001d045208 | EntrezGene:100279167 |
| InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF121 | PFAM:PF13359 | ProteinID:AQL01834.1 | SEG:seg |
| SignalP:SignalP-noTM | UniParc:UPI000182FD87 | UniProt:B6UIJ2 | MapMan:35.2 | : | : |
Description
Ping-Pong family plant transposase1PIF / Ping-Pong family of plant transposases
Coordinates
chr9:-:16083372..16084520
Molecular Weight (calculated)
40376.3 Da
IEP (calculated)
5.631
GRAVY (calculated)
-0.035
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTPLPLLLT AHSAAALLVL LGPTARSRKR LRRDEASSAS DSEATDPDPD PDPDPDPAPE QEAPPPAPLP LPPTSLDDYP LAFRVSAPTF HFLSGLLEPL
101: LSHPSSLPSP VLLALALARL ASGLPYPALA ELFGVPPSAP RAASRRLRRV LLANFRFWLA FPSDPTGAYS APLPSCRGAL CCARFAGPTG PLATQLVAGA
201: SSRVLSLTAG FRGDRTDLEV LRLSSLYQEA EHGKLLDSQQ YLVGDGGGYP LLPWLMVPFP GPLVPGSPEA EFNAAHRAMC RPVRRVIRSL MGWGAIARLH
301: EEESSRAAVA CIGTCAMLHN VLLSREDYSA LAPDVEEADS DLGGLHSQRD DAGAGAGLEI DGRALALRSA LAATTRDLRA PD
101: LSHPSSLPSP VLLALALARL ASGLPYPALA ELFGVPPSAP RAASRRLRRV LLANFRFWLA FPSDPTGAYS APLPSCRGAL CCARFAGPTG PLATQLVAGA
201: SSRVLSLTAG FRGDRTDLEV LRLSSLYQEA EHGKLLDSQQ YLVGDGGGYP LLPWLMVPFP GPLVPGSPEA EFNAAHRAMC RPVRRVIRSL MGWGAIARLH
301: EEESSRAAVA CIGTCAMLHN VLLSREDYSA LAPDVEEADS DLGGLHSQRD DAGAGAGLEI DGRALALRSA LAATTRDLRA PD
001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
Arabidopsis Description
Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.