Factsheet for Zm00001d048620_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0702700-01	Rice	mitochondrion	79.74	79.54
Zm00001d006850_P001	Maize	cytosol	42.05	79.23
Solyc11g073090.1.1	Tomato	cytosol	47.95	56.84
VIT_06s0004g04160.t01	Wine grape	nucleus	54.1	54.95
Zm00001d005463_P001	Maize	cytosol	21.79	51.52
Solyc05g054670.2.1	Tomato	cytosol	51.54	50.89
HORVU6Hr1G009940.1	Barley	cytosol	38.46	48.39
Bra007153.1-P	Field mustard	nucleus	49.49	47.65
AT3G55350.1	Thale cress	nucleus	48.97	47.04
HORVU6Hr1G003140.1	Barley	cytosol	20.77	45.51
HORVU6Hr1G010180.1	Barley	cytosol	34.87	45.03
VIT_13s0019g00460.t01	Wine grape	plastid	42.05	42.49
Zm00001d018916_P001	Maize	cytosol	43.59	41.98
HORVU6Hr1G010140.1	Barley	cytosol	36.15	41.84
HORVU7Hr1G122380.2	Barley	cytosol	33.59	41.2
Zm00001d038377_P002	Maize	nucleus	46.92	40.94
Zm00001d009746_P001	Maize	cytosol, nucleus, plastid	23.33	20.18
Zm00001d039524_P001	Maize	cytosol	23.59	19.49
Zm00001d026435_P001	Maize	plastid	21.03	18.59
Zm00001d010356_P001	Maize	nucleus	22.56	18.45
Zm00001d010344_P001	Maize	cytosol	20.77	17.05
Zm00001d044300_P001	Maize	cytosol	23.85	16.37
Zm00001d045208_P001	Maize	endoplasmic reticulum, vacuole	15.9	16.23
Zm00001d010347_P001	Maize	nucleus, plastid	11.28	14.24

Protein Annotations

EMBL:BT036570	EnsemblPlants:Zm00001d048620_P001	EnsemblPlants:Zm00001d048620_T001	EnsemblPlantsGene:Zm00001d048620	EntrezGene:100194119	InterPro:HARBI1_dom
PANTHER:PTHR22930	PANTHER:PTHR22930:SF110	PFAM:PF13359	ProteinID:AQK48272.1	SEG:seg	UniParc:UPI00017B706C
UniProt:B4FHI2	MapMan:35.1	:	:	:	:

Description

PIF / Ping-Pong family of plant transposases

Coordinates

chr4:-:1475647..1478778

Molecular Weight (calculated)

43934.8 Da

IEP (calculated)

7.685

GRAVY (calculated)

-0.295

Length

390 amino acids

Sequence
(BLAST)

001: MPPLRGAKRR RKAALEKKAA AVAMASAAAG DPPGDWWEAF CIRMSGTLSS IEDAQRFESI FKMPRRAFDY VCNLVRDEMM VRSCSYTFLD GTVLCLEDRV
101: AIALRRLNSG GSLVTVGSSV GVNHSTVSLI TWRFIEAMEE RASHHLRWPD SIEMEKIKSK FEKIHGLPNC CGVVDTTHIT MCLSSAEPNC KVWLDQEKNY
201: SMVLQAVVDL DTKFTDIVTG WPGSMKESSI LHSSGLFKLC EKGERLNGSK LKVSDGSEIG EYLIGDSGYP LLPWLLTPYQ EKDLTESSAE FNIRHSSART
301: VAPRTLAKFK DTWKFLQGEM WRPDKHKLPR IIHVCCLLHN IIIDLQETAV DEAQAWPSDH DAKYRQQVCQ LADENGVRVR DKLSQHLISK

Best Arabidopsis Sequence Match ( AT3G55350.1 )
(BLAST)

001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA

Arabidopsis Description

Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.