Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G010180.1 | Barley | cytosol | 85.76 | 95.7 |
| HORVU6Hr1G003140.1 | Barley | cytosol | 50.45 | 95.51 |
| HORVU6Hr1G009940.1 | Barley | cytosol | 49.55 | 53.87 |
| HORVU7Hr1G122380.2 | Barley | cytosol | 37.69 | 39.94 |
| Os11t0702700-01 | Rice | mitochondrion | 42.14 | 36.32 |
| Zm00001d048620_P001 | Maize | mitochondrion | 41.84 | 36.15 |
| VIT_06s0004g04160.t01 | Wine grape | nucleus | 40.06 | 35.16 |
| Solyc11g073090.1.1 | Tomato | cytosol | 32.94 | 33.74 |
| Zm00001d006850_P001 | Maize | cytosol | 20.47 | 33.33 |
| AT3G55350.1 | Thale cress | nucleus | 37.09 | 30.79 |
| Solyc05g054670.2.1 | Tomato | cytosol | 35.91 | 30.63 |
| Bra007153.1-P | Field mustard | nucleus | 36.8 | 30.62 |
| VIT_13s0019g00460.t01 | Wine grape | plastid | 30.86 | 26.94 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G010140.1 | EnsemblPlantsGene:HORVU6Hr1G010140 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF85 | PFAM:PF13359 |
| SEG:seg | UniParc:UPI000B46A504 | UniProt:A0A287TA01 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr6H:-:17958222..17960070
Molecular Weight (calculated)
38330.4 Da
IEP (calculated)
6.046
GRAVY (calculated)
-0.359
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: QTGPEWDKFS RAEHAKAYAG EGRYVLYKAK PYNLETNVSS FMSRGALSYS DDAQRFESVF KVTSKTFSYI CSLVKVPSWE YTDSYTFVDG RVLSLEDKVA
101: VALRRLYSTE PSETLESSLG VNESTILLVT ERFVAAVYER GMHHVHWPDS SKMDKIKYML GNIHNMHNCC GVIHTTHVPF GPNYGHGKTE NIIMQYFVDP
201: EMRFWNIHLT SAGSMDQLSI LQNSKFFKEC EKGAHLNGSK LKAYLDGPEV GEYIIGDEGY PLLPWLITPY QQEDLSDSKA EFNRRHSSAT SCALKALARF
301: EDTWSCLQGE TRWPDNLDTL EMMLGACCLL HNIVIDM
101: VALRRLYSTE PSETLESSLG VNESTILLVT ERFVAAVYER GMHHVHWPDS SKMDKIKYML GNIHNMHNCC GVIHTTHVPF GPNYGHGKTE NIIMQYFVDP
201: EMRFWNIHLT SAGSMDQLSI LQNSKFFKEC EKGAHLNGSK LKAYLDGPEV GEYIIGDEGY PLLPWLITPY QQEDLSDSKA EFNRRHSSAT SCALKALARF
301: EDTWSCLQGE TRWPDNLDTL EMMLGACCLL HNIVIDM
001: MKAAVFRNED GDEEEEEEEE EEVCNVFDGG EVESKRNNET KNLKGFFTSL LLMEEHEKQD QEARNAASRR EMSDFQSNYR KRARTMSDYY SDLNDYYADA
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL
Arabidopsis Description
AT5g12010/F14F18_180 [Source:UniProtKB/TrEMBL;Acc:Q9LYH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.