Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G003140.1 | Barley | cytosol | 55.96 | 94.94 |
| HORVU6Hr1G010140.1 | Barley | cytosol | 95.7 | 85.76 |
| HORVU6Hr1G009940.1 | Barley | cytosol | 53.64 | 52.26 |
| HORVU7Hr1G122380.2 | Barley | cytosol | 40.07 | 38.05 |
| Os11t0702700-01 | Rice | mitochondrion | 46.36 | 35.81 |
| Zm00001d048620_P001 | Maize | mitochondrion | 45.03 | 34.87 |
| VIT_06s0004g04160.t01 | Wine grape | nucleus | 42.05 | 33.07 |
| Solyc11g073090.1.1 | Tomato | cytosol | 35.1 | 32.22 |
| Zm00001d006850_P001 | Maize | cytosol | 21.85 | 31.88 |
| Bra007153.1-P | Field mustard | nucleus | 39.4 | 29.38 |
| Solyc05g054670.2.1 | Tomato | cytosol | 38.41 | 29.37 |
| AT3G55350.1 | Thale cress | nucleus | 39.07 | 29.06 |
| VIT_13s0019g00460.t01 | Wine grape | plastid | 33.11 | 25.91 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G010180.1 | EnsemblPlantsGene:HORVU6Hr1G010180 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF85 | PFAM:PF13359 |
| SEG:seg | UniParc:UPI000B4783F0 | UniProt:A0A287TA24 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr6H:-:17995426..17998588
Molecular Weight (calculated)
34291.8 Da
IEP (calculated)
6.075
GRAVY (calculated)
-0.236
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MNCIITLPVS SYAGALSYSD DARRFEYVFK VTSKTFSYIC SLVKVPSWEY TDSYTFVDGR VLSLEDKVAV ALRRLYSTEP SETLESSLGV NESTILLVTE
101: RFVAAVYERG MHHVHWPDSS KMDKIKYMLG NIHNMHNCCG VIHTTHVPFG PNYGHGKTQN IIMQYFVDPE MRFWNIHLTS AGSMDQLSIL QNSKFFKECE
201: KGAHLNGSKL KAYLDGPEVG EYIIGDEGYP LLSWLITPYQ QEDLSDSKAE FNRRHSSATS CALKALARFE DTWSCLQGET RWPDNLDTLE MMLGACCLLH
301: NI
101: RFVAAVYERG MHHVHWPDSS KMDKIKYMLG NIHNMHNCCG VIHTTHVPFG PNYGHGKTQN IIMQYFVDPE MRFWNIHLTS AGSMDQLSIL QNSKFFKECE
201: KGAHLNGSKL KAYLDGPEVG EYIIGDEGYP LLSWLITPYQ QEDLSDSKAE FNRRHSSATS CALKALARFE DTWSCLQGET RWPDNLDTLE MMLGACCLLH
301: NI
001: MKAAVFRNED GDEEEEEEEE EEVCNVFDGG EVESKRNNET KNLKGFFTSL LLMEEHEKQD QEARNAASRR EMSDFQSNYR KRARTMSDYY SDLNDYYADA
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL
Arabidopsis Description
AT5g12010/F14F18_180 [Source:UniProtKB/TrEMBL;Acc:Q9LYH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.