Factsheet for Zm00001d006850_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048620_P001	Maize	mitochondrion	79.23	42.05
Os11t0702700-01	Rice	mitochondrion	63.77	33.76
Solyc11g073090.1.1	Tomato	cytosol	50.24	31.61
VIT_06s0004g04160.t01	Wine grape	nucleus	52.17	28.12
HORVU6Hr1G009940.1	Barley	cytosol	40.58	27.1
VIT_13s0019g00460.t01	Wine grape	plastid	45.41	24.35
Solyc05g054670.2.1	Tomato	cytosol	46.38	24.3
AT3G55350.1	Thale cress	nucleus	44.93	22.91
Bra007153.1-P	Field mustard	nucleus	44.44	22.72
Zm00001d018916_P001	Maize	cytosol	44.44	22.72
HORVU6Hr1G010180.1	Barley	cytosol	31.88	21.85
Zm00001d038377_P002	Maize	nucleus	44.93	20.81
HORVU6Hr1G010140.1	Barley	cytosol	33.33	20.47
HORVU7Hr1G122380.2	Barley	cytosol	28.5	18.55
HORVU6Hr1G003140.1	Barley	cytosol	12.56	14.61
Zm00001d039524_P001	Maize	cytosol	26.57	11.65
Zm00001d009746_P001	Maize	cytosol, nucleus, plastid	25.12	11.53
Zm00001d026435_P001	Maize	plastid	24.15	11.34
Zm00001d010356_P001	Maize	nucleus	23.67	10.27
Zm00001d045208_P001	Maize	endoplasmic reticulum, vacuole	18.84	10.21
Zm00001d010344_P001	Maize	cytosol	22.71	9.89
Zm00001d044300_P001	Maize	cytosol	25.6	9.33
Zm00001d005463_P001	Maize	cytosol	7.25	9.09
Zm00001d010347_P001	Maize	nucleus, plastid	11.59	7.77

Protein Annotations

EnsemblPlants:Zm00001d006850_P001	EnsemblPlants:Zm00001d006850_T001	EnsemblPlantsGene:Zm00001d006850	InterPro:HARBI1_dom	PANTHER:PTHR22930	PANTHER:PTHR22930:SF110
PFAM:PF13359	ProteinID:ONM25250.1	UniParc:UPI000220F77D	UniProt:A0A1D6F1A8	MapMan:35.1	:

Description

PIF / Ping-Pong family of plant transposases

Coordinates

chr2:-:217814347..217814970

Molecular Weight (calculated)

23759.6 Da

IEP (calculated)

8.601

GRAVY (calculated)

-0.425

Length

207 amino acids

Sequence
(BLAST)

001: MEGRPNPRTR SCSFTSQEKN YSMVLQAVVD LDTKFTVIVT GWPGSMKESS ILHNSGLFKL CEKGERLSGS KLKVSDGSEI EKYLIGDSGY PLLPWLLTPY
101: QEKDLTESSA KFNIRHSSVR TVALRTLAKF KDTWKFLQGE MWRPDKHKLP RIIHVCYLLH NIIIDLQERA VDEAQAWPSD HDAKYRQQVC QLADENGFPL
201: VLSLRYL

Best Arabidopsis Sequence Match ( AT3G55350.1 )
(BLAST)

001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA

Arabidopsis Description

Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.