Factsheet for Zm00001d010347_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010344_P001	Maize	cytosol	53.07	34.53
Zm00001d010356_P001	Maize	nucleus	43.69	28.3
TraesCS1D01G122700.1	Wheat	cytosol, extracellular, peroxisome	33.66	21.76
TraesCS1B01G141100.1	Wheat	cytosol, extracellular, peroxisome	33.33	21.73
TraesCS1A01G121900.1	Wheat	cytosol, extracellular, plasma membrane	33.01	21.34
Zm00001d039524_P001	Maize	cytosol	32.04	20.97
Os05t0184901-01	Rice	cytosol, endoplasmic reticulum, peroxisome	31.72	20.94
Os05t0184500-00	Rice	cytosol	23.95	20.9
Zm00001d009746_P001	Maize	cytosol, nucleus, plastid	29.45	20.18
Os05t0183900-00	Rice	cytosol	30.1	19.25
GSMUA_Achr6P04860_001	Banana	cytosol, nucleus, plastid	20.71	18.88
GSMUA_Achr5P22180_001	Banana	nucleus	20.06	18.79
PGSC0003DMT400000875	Potato	cytosol	26.21	18.16
VIT_11s0016g01810.t01	Wine grape	nucleus	29.13	17.68
GSMUA_Achr6P00850_001	Banana	nucleus	21.68	17.54
Solyc12g009000.1.1	Tomato	cytosol	26.21	16.74
AT4G29780.1	Thale cress	cytosol	28.16	16.11
Solyc07g040960.1.1	Tomato	cytosol	25.89	16.03
PGSC0003DMT400027828	Potato	cytosol	25.89	15.81
Zm00001d044300_P001	Maize	cytosol	28.8	15.67
Zm00001d005463_P001	Maize	cytosol	6.8	12.73
Zm00001d026435_P001	Maize	plastid	16.83	11.79
Zm00001d038377_P002	Maize	nucleus	16.83	11.63
Zm00001d006850_P001	Maize	cytosol	7.77	11.59
Solyc08g062680.1.1	Tomato	cytosol	5.83	11.46
Zm00001d048620_P001	Maize	mitochondrion	14.24	11.28
Zm00001d045208_P001	Maize	endoplasmic reticulum, vacuole	13.92	11.26
Zm00001d018916_P001	Maize	cytosol	13.92	10.62

Protein Annotations

EnsemblPlants:Zm00001d010347_P001	EnsemblPlants:Zm00001d010347_T001	EnsemblPlantsGene:Zm00001d010347	PANTHER:PTHR22930	PANTHER:PTHR22930:SF64	ProteinID:AQK93924.1
SEG:seg	UniParc:UPI0008443453	UniProt:A0A1D6FQM7	MapMan:35.2	:	:

Description

PIF / Ping-Pong family of plant transposases

Coordinates

chr8:+:110684355..110685319

Molecular Weight (calculated)

32267.4 Da

IEP (calculated)

11.963

GRAVY (calculated)

-0.415

Length

309 amino acids

Sequence
(BLAST)

001: MTMMPLPPQQ CGSRIISPSR ERRRDHHGNT SRSGKRRRPP TRSSQSNDAP GESSDGQAQD QAAATAVASR RCGSGSGAPS GGTTWTGPRA RTRSSGAPSA
101: CRAPTFGALC DALGGAVAKM DTALRTAIPV PPARGRLPLA PRHGRASPRG LPSLRPRDLH QSQHRAQVYQ PWPRCSGPRS STGLALTPLR PVAARFEAAF
201: GLAGIVGALY TTRVPIVAPK ANVAAYYDCG LTERNQKASY SVAVQAVADA DGVFTNVWIG PGSLSDAAIL GRSALSGLLA GGHGQGQRLV VARAIRPWTG
301: CSCRTPTRT

Best Arabidopsis Sequence Match ( AT5G12010.1 )
(BLAST)

001: MKAAVFRNED GDEEEEEEEE EEVCNVFDGG EVESKRNNET KNLKGFFTSL LLMEEHEKQD QEARNAASRR EMSDFQSNYR KRARTMSDYY SDLNDYYADA
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL

Arabidopsis Description

AT5g12010/F14F18_180 [Source:UniProtKB/TrEMBL;Acc:Q9LYH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.