Factsheet for Zm00001d018916_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0175100-01	Rice	nucleus	72.35	67.2
TraesCS2B01G258800.1	Wheat	cytosol	71.11	63.16
TraesCS2A01G244500.1	Wheat	nucleus	70.62	62.58
Solyc06g084150.2.1	Tomato	cytosol	52.84	58.31
Bra040441.1-P	Field mustard	cytosol	55.31	58.18
AT3G63270.1	Thale cress	cytosol	55.31	56.57
VIT_07s0151g00360.t01	Wine grape	cytosol	58.02	54.91
Zm00001d006850_P001	Maize	cytosol	22.72	44.44
Zm00001d048620_P001	Maize	mitochondrion	41.98	43.59
Zm00001d005463_P001	Maize	cytosol	16.05	39.39
Zm00001d038377_P002	Maize	nucleus	35.56	32.21
Zm00001d039524_P001	Maize	cytosol	22.72	19.49
Zm00001d045208_P001	Maize	endoplasmic reticulum, vacuole	18.27	19.37
Zm00001d009746_P001	Maize	cytosol, nucleus, plastid	21.48	19.29
Zm00001d010356_P001	Maize	nucleus	21.48	18.24
Zm00001d010344_P001	Maize	cytosol	20.99	17.89
Zm00001d026435_P001	Maize	plastid	19.01	17.46
Zm00001d044300_P001	Maize	cytosol	22.22	15.85
Zm00001d010347_P001	Maize	nucleus, plastid	10.62	13.92

Protein Annotations

MapMan:12.3.3.1.2.4	EMBL:BT061082	UniProt:C0HFH6	GO:GO:0003674	GO:GO:0003682	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0031936
GO:GO:0035098	GO:GO:0035102	GO:GO:0040029	InterPro:HARBI1_dom	ProteinID:ONM51639.1	PFAM:PF13359
PANTHER:PTHR22930	PANTHER:PTHR22930:SF26	UniParc:UPI000189D780	EnsemblPlantsGene:Zm00001d018916	EnsemblPlants:Zm00001d018916_P001	EnsemblPlants:Zm00001d018916_T001
SEG:seg	:	:	:	:	:

Description

PIF / Ping-Pong family of plant transposases

Coordinates

chr7:-:9215296..9221211

Molecular Weight (calculated)

45656.2 Da

IEP (calculated)

8.257

GRAVY (calculated)

-0.303

Length

405 amino acids

Sequence
(BLAST)

001: MPPVKKSKKG KRKSKDGKLK IVRARGAPPA LPPELRALDT EWWYAFLNKQ VELEHAVPPD EGEAFRHFFR TSRKTFDYIC SIVREDLISR PPSGLINIEG
101: RLLSVEKQVA IAMRRLASGD SQVSVGTAFG VGQSTVSQVT WRFIESMEDR ARYHLAWPSQ ERLEQIKAVL EDAYGLPNCC GGVDATHVIM TLPAVESSAD
201: WCDHAKNYSM FLQGIVDDQM RFIDIVTGWP GSMTFSRLMK CSGFFKLCEA GERLNGSVKV SAEGAEIREY IAGDSCYPLL PWLMTPFEGK HLPAPLQNFN
301: ARQKAARLLG TNALARLKGS WRILHKVMWR PDKNKLPSII LVCCLLHNIL IDCHDELLPS VQLPEHHDTG YNRENCEQVD PNGKVMRENI TAHLQHCEAS
401: KFLCN

Best Arabidopsis Sequence Match ( AT3G63270.1 )
(BLAST)

001: MAPVKQKKKN KKKPLDKAKK LAKNKEKKRV NAVPLDPEAI DCDWWDTFWL RNSSPSVPSD EDYAFKHFFR ASKTTFSYIC SLVREDLISR PPSGLINIEG
101: RLLSVEKQVA IALRRLASGD SQVSVGAAFG VGQSTVSQVT WRFIEALEER AKHHLRWPDS DRIEEIKSKF EEMYGLPNCC GAIDTTHIIM TLPAVQASDD
201: WCDQEKNYSM FLQGVFDHEM RFLNMVTGWP GGMTVSKLLK FSGFFKLCEN AQILDGNPKT LSQGAQIREY VVGGISYPLL PWLITPHDSD HPSDSMVAFN
301: ERHEKVRSVA ATAFQQLKGS WRILSKVMWR PDRRKLPSII LVCCLLHNII IDCGDYLQED VPLSGHHDSG YADRYCKQTE PLGSELRGCL TEHLLR

Arabidopsis Description

ALP1Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94K49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.