Factsheet for Bra040441.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G63270.1	Thale cress	cytosol	84.42	82.07
Solyc06g084150.2.1	Tomato	cytosol	60.0	62.94
VIT_07s0151g00360.t01	Wine grape	cytosol	66.23	59.58
Zm00001d018916_P001	Maize	cytosol	58.18	55.31
Os07t0175100-01	Rice	nucleus	61.82	54.59
TraesCS2B01G258800.1	Wheat	cytosol	61.04	51.54
TraesCS2A01G244500.1	Wheat	nucleus	61.04	51.42
Bra007153.1-P	Field mustard	nucleus	45.19	42.96
Bra023359.1-P	Field mustard	cytosol	24.42	23.98
Bra013151.1-P	Field mustard	plastid	10.65	17.37

Protein Annotations

MapMan:12.3.3.1.2.4	EnsemblPlantsGene:Bra040441	EnsemblPlants:Bra040441.1	EnsemblPlants:Bra040441.1-P	GO:GO:0003674	GO:GO:0003682
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043
GO:GO:0031936	GO:GO:0035098	GO:GO:0035102	GO:GO:0040029	InterPro:HARBI1_dom	UniProt:M4FH63
PFAM:PF13359	PANTHER:PTHR22930	PANTHER:PTHR22930:SF26	UniParc:UPI000254525F	:	:

Description

AT3G63270 (E=7e-195) | unknown protein

Coordinates

chrA04:-:61390..62697

Molecular Weight (calculated)

43264.6 Da

IEP (calculated)

6.063

GRAVY (calculated)

-0.272

Length

385 amino acids

Sequence
(BLAST)

001: MAPPGKKRKG EKAKNGAPPL DPEAIDCEWW DTFFLRNSSL SGVRVPLDED DAFKYFFRAS KTTFSYICSL VREDLISRPP SGLINIEGRL LSVEKQVAIA
101: LRRLASGDSQ VSVGAAFGVG QSTVSQVTWR FIEALEERAK HHLRWPDSDR IEEIKSKFEG VYGLPNCCGA IDTTHIIMTL PAVQASDDWC DQEKNYSMFL
201: QGVFDHEMRF LNMVTGWPGG MTVSKLLNLS GFFKLSESGQ ILDGSAKTLY QGAEIREYVV GGFSYPLLPW LITPHDTGDD PSDPVLAFND RHEKVRSVAA
301: TAFAQLKGSW RILSKVMWRP DRRKLPSIIL VCCLLHNIII DCGDYLEDDV PLSGHHDVGY SERYCKQSEP LGSELRGYLT EYLQR

Best Arabidopsis Sequence Match ( AT3G63270.1 )
(BLAST)

001: MAPVKQKKKN KKKPLDKAKK LAKNKEKKRV NAVPLDPEAI DCDWWDTFWL RNSSPSVPSD EDYAFKHFFR ASKTTFSYIC SLVREDLISR PPSGLINIEG
101: RLLSVEKQVA IALRRLASGD SQVSVGAAFG VGQSTVSQVT WRFIEALEER AKHHLRWPDS DRIEEIKSKF EEMYGLPNCC GAIDTTHIIM TLPAVQASDD
201: WCDQEKNYSM FLQGVFDHEM RFLNMVTGWP GGMTVSKLLK FSGFFKLCEN AQILDGNPKT LSQGAQIREY VVGGISYPLL PWLITPHDSD HPSDSMVAFN
301: ERHEKVRSVA ATAFQQLKGS WRILSKVMWR PDRRKLPSII LVCCLLHNII IDCGDYLQED VPLSGHHDSG YADRYCKQTE PLGSELRGCL TEHLLR

Arabidopsis Description

ALP1Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94K49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.