Factsheet for Os07t0175100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018916_P001	Maize	cytosol	67.2	72.35
TraesCS2B01G258800.1	Wheat	cytosol	72.02	68.86
TraesCS2A01G244500.1	Wheat	nucleus	71.56	68.27
Bra040441.1-P	Field mustard	cytosol	54.59	61.82
Solyc06g084150.2.1	Tomato	cytosol	50.0	59.4
AT3G63270.1	Thale cress	cytosol	53.44	58.84
VIT_07s0151g00360.t01	Wine grape	cytosol	55.73	56.78
Os11t0702700-01	Rice	mitochondrion	38.99	43.48
Os01t0838900-01	Rice	cytosol, mitochondrion	35.09	38.64
Os05t0593000-01	Rice	cytosol, nucleus, plastid	22.71	23.4
Os01t0186900-02	Rice	cytosol	22.71	21.85
Os05t0184901-01	Rice	cytosol, endoplasmic reticulum, peroxisome	23.39	21.79
Os05t0183900-00	Rice	cytosol	22.25	20.08
Os01t0582600-01	Rice	nucleus	24.54	19.42
Os05t0184500-00	Rice	cytosol	15.37	18.93
Os06t0164500-00	Rice	mitochondrion	18.35	18.35
Os04t0644200-00	Rice	mitochondrion	21.1	16.82

Protein Annotations

MapMan:12.3.3.1.2.4	ProteinID:BAF20925.1	ProteinID:BAT00275.1	GO:GO:0003674	GO:GO:0003682	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0031936
GO:GO:0035098	GO:GO:0035102	GO:GO:0040029	InterPro:HARBI1_dom	EnsemblPlantsGene:Os07g0175100	EnsemblPlants:Os07t0175100-01
PFAM:PF13359	PANTHER:PTHR22930	PANTHER:PTHR22930:SF26	UniProt:Q0D898	UniParc:UPI0000E129FA	SEG:seg

Description

Homeodomain-like containing protein. (Os07t0175100-01)

Coordinates

chr7:-:3952983..3954879

Molecular Weight (calculated)

49070.2 Da

IEP (calculated)

9.345

GRAVY (calculated)

-0.485

Length

436 amino acids

Sequence
(BLAST)

001: KKKNPSKRGR KRGGRGEGRE KKVEEISSSS SSRGRGRRRM APVKKSKKGK RKSKDSGKLK IVKYGGGAPP LPPELRGLDT EWWYTFLHKH SELGLSAPSD
101: EGEAFRYFFR TSRRTFDYIC SIVREDLISR PPSGLINIEG RLLSVEKQVA IAMRRLASGD SQVSVGAAFG VGQSTVSQVT WRFIESMEER ARHHLVWPGQ
201: ERMEQIKARF EAESGLPNCC GAIDATHIIM TLPAVESSED WCDPAKNYSM FLQGIVDDEM RFIDIVTGWP GSMMFSRLLK CSGFFKHCDA GTRLDGPVMV
301: SAENGEIREY IVGNNCYPLL PWLMTPYEGE SLSAPMASFN ARQKAARTLG PRALSRLKGS WRILNKVMWR PDKNKLPSII LVCCLLHNII IDCEDELLPD
401: VQLPDHHDTG YSEEKCEQVD PNGKIMRDVI TGYLQI

Best Arabidopsis Sequence Match ( AT3G63270.1 )
(BLAST)

001: MAPVKQKKKN KKKPLDKAKK LAKNKEKKRV NAVPLDPEAI DCDWWDTFWL RNSSPSVPSD EDYAFKHFFR ASKTTFSYIC SLVREDLISR PPSGLINIEG
101: RLLSVEKQVA IALRRLASGD SQVSVGAAFG VGQSTVSQVT WRFIEALEER AKHHLRWPDS DRIEEIKSKF EEMYGLPNCC GAIDTTHIIM TLPAVQASDD
201: WCDQEKNYSM FLQGVFDHEM RFLNMVTGWP GGMTVSKLLK FSGFFKLCEN AQILDGNPKT LSQGAQIREY VVGGISYPLL PWLITPHDSD HPSDSMVAFN
301: ERHEKVRSVA ATAFQQLKGS WRILSKVMWR PDRRKLPSII LVCCLLHNII IDCGDYLQED VPLSGHHDSG YADRYCKQTE PLGSELRGCL TEHLLR

Arabidopsis Description

ALP1Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94K49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.