Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G212000.1 | Wheat | cytosol, mitochondrion, nucleus | 74.41 | 77.07 |
| TraesCS3A01G209100.1 | Wheat | cytosol, nucleus, plastid | 74.23 | 76.74 |
| TraesCS3B01G239400.1 | Wheat | cytosol | 71.69 | 74.53 |
| Zm00001d044300_P001 | Maize | cytosol | 71.87 | 69.72 |
| Solyc08g062680.1.1 | Tomato | cytosol | 19.6 | 68.79 |
| Os05t0593000-01 | Rice | cytosol, nucleus, plastid | 51.0 | 66.43 |
| VIT_11s0016g01810.t01 | Wine grape | nucleus | 53.36 | 57.76 |
| PGSC0003DMT400000875 | Potato | cytosol | 46.64 | 57.62 |
| GSMUA_Achr6P00850_001 | Banana | nucleus | 38.84 | 56.02 |
| GSMUA_Achr5P22180_001 | Banana | nucleus | 33.03 | 55.15 |
| GSMUA_Achr6P04860_001 | Banana | cytosol, nucleus, plastid | 33.58 | 54.57 |
| PGSC0003DMT400027828 | Potato | cytosol | 49.73 | 54.15 |
| Os01t0186900-02 | Rice | cytosol | 43.92 | 53.42 |
| Solyc07g040960.1.1 | Tomato | cytosol | 48.09 | 53.11 |
| Solyc12g009000.1.1 | Tomato | cytosol | 45.92 | 52.27 |
| AT4G29780.1 | Thale cress | cytosol | 46.1 | 47.04 |
| Os05t0184901-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 37.93 | 44.66 |
| Os05t0183900-00 | Rice | cytosol | 36.12 | 41.2 |
| Os05t0184500-00 | Rice | cytosol | 20.69 | 32.2 |
| Os01t0838900-01 | Rice | cytosol, mitochondrion | 17.79 | 24.75 |
| Os11t0702700-01 | Rice | mitochondrion | 17.42 | 24.55 |
| Os07t0175100-01 | Rice | nucleus | 19.42 | 24.54 |
| Os06t0164500-00 | Rice | mitochondrion | 15.06 | 19.04 |
| Os04t0644200-00 | Rice | mitochondrion | 17.42 | 17.55 |
Protein Annotations
| EnsemblPlants:Os01t0582600-01 | EnsemblPlantsGene:Os01g0582600 | EntrezGene:4324200 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF113 |
| PFAM:PF13359 | ProteinID:BAC05572.1 | ProteinID:BAS72873.1 | RefSeq:XP_015622298.1 | SEG:seg | UniParc:UPI00000AB6E4 |
| UniProt:Q8LJ71 | MapMan:35.1 | : | : | : | : |
Description
Phospholipase A2, active site domain containing protein. (Os01t0582600-01)
Coordinates
chr1:+:22604528..22606674
Molecular Weight (calculated)
59322.1 Da
IEP (calculated)
7.911
GRAVY (calculated)
-0.337
Length
551 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSTSGARPS SGGGGGDDDY AFYYSFFQDA AAAAASPLGL DDAAAMTNGG RKRKRGGGGD GADGGAPAAS RKDGPGGDGE GGNGRKRSIA KILTSLAALE
101: AEEHSDRAGA ADASRRELAL LESNADHKSQ AMMDYYAKME GSFDAAAESD ATARSKRSRL AASATTAAVV ATEEGAAETA SASASPSRAS GGGGAGHHQR
201: RLWVKDRSRA WWDKCNSPDY PEEEFRRAFR MGRETFDMIC EALGSAVAKE DTMLRAAIPV RQRVAVCIWR LATGEPLRLV SKRFGLGIST CHKLVLEVCA
301: AIKSVLMPRF LQWPDEAAAA AFKERFQAAY GVPGVIGAMY TTHIPIIAPK ISVAAYFNRR HTERNQKTSY SITLQGVVGP DGAFTDVCIG WPGSMPDDQV
401: LEKSMLHQRA AAGMMHSACL VGGASYPLMD WVLVPYTHQN LTWTQHAFNE KVGDLRRVAV DAFARLKARW ACLQKRTEVK LQDLPVVLGA CCVLHNICET
501: RGEELEPELR FELVDDETSP ETPVRSEAAK RARDNIAHNL LHRGFAGTTF F
101: AEEHSDRAGA ADASRRELAL LESNADHKSQ AMMDYYAKME GSFDAAAESD ATARSKRSRL AASATTAAVV ATEEGAAETA SASASPSRAS GGGGAGHHQR
201: RLWVKDRSRA WWDKCNSPDY PEEEFRRAFR MGRETFDMIC EALGSAVAKE DTMLRAAIPV RQRVAVCIWR LATGEPLRLV SKRFGLGIST CHKLVLEVCA
301: AIKSVLMPRF LQWPDEAAAA AFKERFQAAY GVPGVIGAMY TTHIPIIAPK ISVAAYFNRR HTERNQKTSY SITLQGVVGP DGAFTDVCIG WPGSMPDDQV
401: LEKSMLHQRA AAGMMHSACL VGGASYPLMD WVLVPYTHQN LTWTQHAFNE KVGDLRRVAV DAFARLKARW ACLQKRTEVK LQDLPVVLGA CCVLHNICET
501: RGEELEPELR FELVDDETSP ETPVRSEAAK RARDNIAHNL LHRGFAGTTF F
001: MKAAVFRNED GDEEEEEEEE EEVCNVFDGG EVESKRNNET KNLKGFFTSL LLMEEHEKQD QEARNAASRR EMSDFQSNYR KRARTMSDYY SDLNDYYADA
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL
Arabidopsis Description
AT5g12010/F14F18_180 [Source:UniProtKB/TrEMBL;Acc:Q9LYH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.