Factsheet for AT3G55350.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007153.1-P	Field mustard	nucleus	80.54	80.74
Solyc05g054670.2.1	Tomato	cytosol	54.43	55.95
Zm00001d005463_P001	Maize	cytosol	22.66	55.76
VIT_13s0019g00460.t01	Wine grape	plastid	47.54	50.0
Os11t0702700-01	Rice	mitochondrion	47.54	49.36
Zm00001d048620_P001	Maize	mitochondrion	47.04	48.97
TraesCS3B01G389300.1	Wheat	mitochondrion	46.55	47.85
Os01t0838900-01	Rice	cytosol, mitochondrion	46.55	47.73
TraesCS3A01G356500.1	Wheat	mitochondrion	46.31	47.47
TraesCS3D01G350500.1	Wheat	mitochondrion	46.31	47.47
Zm00001d006850_P001	Maize	cytosol	22.91	44.93
AT3G63270.1	Thale cress	cytosol	42.61	43.69
Zm00001d038377_P002	Maize	nucleus	44.58	40.49
HORVU6Hr1G010180.1	Barley	cytosol	29.06	39.07
HORVU6Hr1G003140.1	Barley	cytosol	17.0	38.76
HORVU6Hr1G009940.1	Barley	cytosol	29.31	38.39
HORVU6Hr1G010140.1	Barley	cytosol	30.79	37.09
HORVU7Hr1G122380.2	Barley	cytosol	28.08	35.85
AT5G12010.1	Thale cress	cytosol	26.6	21.51
AT1G72275.1	Thale cress	cytosol	20.69	19.81
AT4G29780.1	Thale cress	cytosol	25.86	19.44
AT3G19120.1	Thale cress	plastid	19.95	18.16

Protein Annotations

MapMan:35.1	EntrezGene:824701	UniProt:A0A178V9W4	ProteinID:AEE79371.1	EMBL:AK117365	ArrayExpress:AT3G55350
EnsemblPlantsGene:AT3G55350	RefSeq:AT3G55350	TAIR:AT3G55350	RefSeq:AT3G55350-TAIR-G	EnsemblPlants:AT3G55350.1	TAIR:AT3G55350.1
EMBL:AY087712	EMBL:BT009674	ProteinID:CAB75893.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004518
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046872	GO:GO:0090305
InterPro:HARBI1_dom	RefSeq:NP_191095.1	ProteinID:OAP02501.1	PFAM:PF13359	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PANTHER:PTHR22930	PANTHER:PTHR22930:SF110	UniProt:Q9M2U3	UniParc:UPI00000ABEFA	SEG:seg	:

Description

Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]

Coordinates

chr3:+:20518266..20520956

Molecular Weight (calculated)

45469.2 Da

IEP (calculated)

7.434

GRAVY (calculated)

-0.427

Length

406 amino acids

Sequence
(BLAST)

001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.