Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0063g00920.t01 | Wine grape | plastid | 65.47 | 65.03 |
| AT1G72275.1 | Thale cress | cytosol | 20.85 | 21.93 |
| AT3G63270.1 | Thale cress | cytosol | 18.83 | 21.21 |
| AT3G55350.1 | Thale cress | nucleus | 18.16 | 19.95 |
| AT5G12010.1 | Thale cress | cytosol | 19.06 | 16.93 |
| AT4G29780.1 | Thale cress | cytosol | 20.18 | 16.67 |
Protein Annotations
| MapMan:35.1 | EntrezGene:821446 | ProteinID:AEE76195.1 | ArrayExpress:AT3G19120 | EnsemblPlantsGene:AT3G19120 | RefSeq:AT3G19120 |
| TAIR:AT3G19120 | RefSeq:AT3G19120-TAIR-G | EnsemblPlants:AT3G19120.1 | TAIR:AT3G19120.1 | EMBL:AY070731 | EMBL:AY149933 |
| Unigene:At.28342 | ProteinID:BAB02952.1 | InterPro:HARBI1_dom | RefSeq:NP_566626.1 | PFAM:PF13359 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF58 |
| UniProt:Q9LJL8 | UniParc:UPI00000AC415 | SEG:seg | : | : | : |
Description
At3g19120/MVI11_3 [Source:UniProtKB/TrEMBL;Acc:Q9LJL8]
Coordinates
chr3:-:6609350..6611138
Molecular Weight (calculated)
49420.4 Da
IEP (calculated)
8.203
GRAVY (calculated)
-0.076
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAFMAMLS HLLHLQNSLD PTSTLFSSAS TSSQSSTTPS SLLSTSSAAP LLFFTLASLL SFLAVNRSST ESSSSSESPS PSPPPPLADG DYSVAAFRAL
101: TTDHIWSLDA PLRDARWRSL YGLSYPVFIT VVDKLKPFIT ASNLSLPADY AVAMVLSRLA HGCSAKTLAS RYSLDPYLIS KITNMVTRLL ATKLYPEFIK
201: IPVGKRRLIE TTQGFEELTS LPNICGAIDS TPVKLRRRTK LNPRNIYGCK YGYDAVLLQV VADHKKIFWD VCVKAPGGED DSSHFRDSLL YKRLTSGDIV
301: WEKVINIRGH HVRPYIVGDW CYPLLSFLMT PFSPNGSGTP PENLFDGMLM KGRSVVVEAI GLLKARWKIL QSLNVGVNHA PQTIVACCVL HNLCQIAREP
401: EPEIWKDPDE AGTPARVLES ERQFYYYGES LRQALAEDLH QRLSSR
101: TTDHIWSLDA PLRDARWRSL YGLSYPVFIT VVDKLKPFIT ASNLSLPADY AVAMVLSRLA HGCSAKTLAS RYSLDPYLIS KITNMVTRLL ATKLYPEFIK
201: IPVGKRRLIE TTQGFEELTS LPNICGAIDS TPVKLRRRTK LNPRNIYGCK YGYDAVLLQV VADHKKIFWD VCVKAPGGED DSSHFRDSLL YKRLTSGDIV
301: WEKVINIRGH HVRPYIVGDW CYPLLSFLMT PFSPNGSGTP PENLFDGMLM KGRSVVVEAI GLLKARWKIL QSLNVGVNHA PQTIVACCVL HNLCQIAREP
401: EPEIWKDPDE AGTPARVLES ERQFYYYGES LRQALAEDLH QRLSSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.