Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400066745 | Potato | endoplasmic reticulum, plasma membrane | 77.54 | 75.71 |
| VIT_03s0063g00150.t01 | Wine grape | extracellular, vacuole | 45.17 | 41.19 |
| GSMUA_Achr9P00980_001 | Banana | endoplasmic reticulum, plasma membrane | 36.47 | 36.12 |
| TraesCS7D01G124800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 26.81 | 28.98 |
| TraesCS7B01G026400.1 | Wheat | endoplasmic reticulum, plasma membrane | 27.05 | 28.72 |
| Zm00001d045208_P001 | Maize | endoplasmic reticulum, vacuole | 25.85 | 28.01 |
| Os06t0164500-00 | Rice | mitochondrion | 25.85 | 24.54 |
| Solyc08g062680.1.1 | Tomato | cytosol | 8.45 | 22.29 |
| Solyc11g073090.1.1 | Tomato | cytosol | 15.46 | 19.45 |
| Solyc07g007360.1.1 | Tomato | cytosol, mitochondrion, nucleus | 19.32 | 17.94 |
| Solyc12g009000.1.1 | Tomato | cytosol | 20.77 | 17.77 |
| Solyc06g084150.2.1 | Tomato | cytosol | 15.7 | 17.71 |
| Solyc05g054670.2.1 | Tomato | cytosol | 16.67 | 17.47 |
| Solyc07g040960.1.1 | Tomato | cytosol | 18.6 | 15.43 |
Protein Annotations
| EnsemblPlants:Solyc01g107920.2.1 | EnsemblPlantsGene:Solyc01g107920.2 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF121 | PFAM:PF13359 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000276804D | UniProt:K4B308 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1:-:95305274..95306575
Molecular Weight (calculated)
45923.1 Da
IEP (calculated)
6.833
GRAVY (calculated)
0.043
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPRNLAALL SSLIAQLLLL ITVVFPSSNP LCITNSSLSH FLTPLLLHFL SVSETAATLS RKRKRIHFSE FDAPEGEGLT RFKLGRPDSF IRRNPDCFKK
101: FFNINSSTFD WLCGLLEPLL ECRDPVDSPL NLAAETRLGI GLFRLATGAN FSDVSRRFTV SESVAKFCFK QLCRVLCTNF RFWVGFLNSG ELESVSNRFE
201: SISGIPNCCG VLCCVRFKVN EESIAAQLVV DSSSRIISII AGFRGDKTDF QVLNSSTLFE DIEKGTIFTN SQGLEINGVS VPQFLVGNGD YPLLNWLMLP
301: FDDPISQSNE EKFNNAINVM RLPSVIAVQS LRNWGVLREP IEGEIKTVVA SIGACSILHN MSLSRDDYSA FCDDLNEYSP DKRKSCSNPG ETKTVACSIR
401: SALVTKVTKA TEFQ
101: FFNINSSTFD WLCGLLEPLL ECRDPVDSPL NLAAETRLGI GLFRLATGAN FSDVSRRFTV SESVAKFCFK QLCRVLCTNF RFWVGFLNSG ELESVSNRFE
201: SISGIPNCCG VLCCVRFKVN EESIAAQLVV DSSSRIISII AGFRGDKTDF QVLNSSTLFE DIEKGTIFTN SQGLEINGVS VPQFLVGNGD YPLLNWLMLP
301: FDDPISQSNE EKFNNAINVM RLPSVIAVQS LRNWGVLREP IEGEIKTVVA SIGACSILHN MSLSRDDYSA FCDDLNEYSP DKRKSCSNPG ETKTVACSIR
401: SALVTKVTKA TEFQ
001: MAPVKQKKKN KKKPLDKAKK LAKNKEKKRV NAVPLDPEAI DCDWWDTFWL RNSSPSVPSD EDYAFKHFFR ASKTTFSYIC SLVREDLISR PPSGLINIEG
101: RLLSVEKQVA IALRRLASGD SQVSVGAAFG VGQSTVSQVT WRFIEALEER AKHHLRWPDS DRIEEIKSKF EEMYGLPNCC GAIDTTHIIM TLPAVQASDD
201: WCDQEKNYSM FLQGVFDHEM RFLNMVTGWP GGMTVSKLLK FSGFFKLCEN AQILDGNPKT LSQGAQIREY VVGGISYPLL PWLITPHDSD HPSDSMVAFN
301: ERHEKVRSVA ATAFQQLKGS WRILSKVMWR PDRRKLPSII LVCCLLHNII IDCGDYLQED VPLSGHHDSG YADRYCKQTE PLGSELRGCL TEHLLR
101: RLLSVEKQVA IALRRLASGD SQVSVGAAFG VGQSTVSQVT WRFIEALEER AKHHLRWPDS DRIEEIKSKF EEMYGLPNCC GAIDTTHIIM TLPAVQASDD
201: WCDQEKNYSM FLQGVFDHEM RFLNMVTGWP GGMTVSKLLK FSGFFKLCEN AQILDGNPKT LSQGAQIREY VVGGISYPLL PWLITPHDSD HPSDSMVAFN
301: ERHEKVRSVA ATAFQQLKGS WRILSKVMWR PDRRKLPSII LVCCLLHNII IDCGDYLQED VPLSGHHDSG YADRYCKQTE PLGSELRGCL TEHLLR
Arabidopsis Description
ALP1Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94K49]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.