Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0063g00150.t01 | Wine grape | extracellular, vacuole | 49.04 | 45.15 |
| TraesCS7B01G026400.1 | Wheat | endoplasmic reticulum, plasma membrane | 36.6 | 39.23 |
| TraesCS7D01G124800.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 35.41 | 38.64 |
| PGSC0003DMT400066745 | Potato | endoplasmic reticulum, plasma membrane | 38.28 | 37.74 |
| Zm00001d045208_P001 | Maize | endoplasmic reticulum, vacuole | 34.45 | 37.7 |
| Solyc01g107920.2.1 | Tomato | extracellular, plasma membrane | 36.12 | 36.47 |
| Os06t0164500-00 | Rice | mitochondrion | 35.89 | 34.4 |
| GSMUA_Achr6P00850_001 | Banana | nucleus | 16.75 | 18.32 |
| GSMUA_Achr5P22180_001 | Banana | nucleus | 14.35 | 18.18 |
| GSMUA_Achr6P04860_001 | Banana | cytosol, nucleus, plastid | 14.11 | 17.4 |
| GSMUA_Achr7P24010_001 | Banana | nucleus | 15.55 | 13.08 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P00980_001 | EnsemblPlants:GSMUA_Achr9T00980_001 | EnsemblPlantsGene:GSMUA_Achr9G00980_001 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF121 |
| PFAM:PF13359 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI000294DA2B | UniProt:M0TWF5 | MapMan:35.1 |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G00980_001]
Coordinates
chr9:+:719453..720709
Molecular Weight (calculated)
45814.4 Da
IEP (calculated)
8.044
GRAVY (calculated)
0.021
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPKQLAALV SSLVSQALLL LSLPFPHPNP CASVPNRNNL PLFLFSSPPT PLAPLLSLLL HLLSSSSHIA ASVHFLPHKR KRKRHQHQPD LHVPRRGPDH
101: FRLCFRMTST TFEWLSGLLD PLLDCRDPAG SALRLSGPTR LAIALSRLAS GASYPDLAYR FGVPESAARF CSKHLCRVLC TNFRFWLTFP SPSDLTTVSA
201: GFQAVGHGLP DCCGAMACTR FEARGQSVVA AQIVADSSSR IIHIAAGFRG DRTDSSVLKC SSLYKDVQEG QLLGATQYLV GDGRYPLLPW LMVPFTDPVR
301: GSCEEDFNAV HQSMCRPVLR VVCSMRNWGV LSSLGEEENF KVAVACIGTC AILHNVLLMR EDYSALSDVS NENHMGLEHY GEDLGLEDFY CEMKASTLRS
401: MLAVRARAAR DSGQIGIP
101: FRLCFRMTST TFEWLSGLLD PLLDCRDPAG SALRLSGPTR LAIALSRLAS GASYPDLAYR FGVPESAARF CSKHLCRVLC TNFRFWLTFP SPSDLTTVSA
201: GFQAVGHGLP DCCGAMACTR FEARGQSVVA AQIVADSSSR IIHIAAGFRG DRTDSSVLKC SSLYKDVQEG QLLGATQYLV GDGRYPLLPW LMVPFTDPVR
301: GSCEEDFNAV HQSMCRPVLR VVCSMRNWGV LSSLGEEENF KVAVACIGTC AILHNVLLMR EDYSALSDVS NENHMGLEHY GEDLGLEDFY CEMKASTLRS
401: MLAVRARAAR DSGQIGIP
001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
Arabidopsis Description
Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.