Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G110000.1 | Wheat | cytosol | 64.72 | 66.34 |
| TraesCS3D01G111900.1 | Wheat | cytosol | 65.09 | 63.65 |
| Solyc08g062680.1.1 | Tomato | cytosol | 13.96 | 47.13 |
| TraesCS1B01G475800.1 | Wheat | cytosol, nucleus, plastid | 40.57 | 45.65 |
| TraesCS1B01G141100.1 | Wheat | cytosol, extracellular, peroxisome | 39.62 | 44.3 |
| GSMUA_Achr5P22180_001 | Banana | nucleus | 26.42 | 42.42 |
| PGSC0003DMT400000875 | Potato | cytosol | 35.66 | 42.38 |
| GSMUA_Achr6P00850_001 | Banana | nucleus | 30.0 | 41.62 |
| GSMUA_Achr6P04860_001 | Banana | cytosol, nucleus, plastid | 25.85 | 40.41 |
| Solyc12g009000.1.1 | Tomato | cytosol | 35.28 | 38.64 |
| VIT_11s0016g01810.t01 | Wine grape | nucleus | 36.98 | 38.51 |
| TraesCS3B01G239400.1 | Wheat | cytosol | 38.49 | 38.49 |
| PGSC0003DMT400027828 | Potato | cytosol | 36.04 | 37.75 |
| Solyc07g040960.1.1 | Tomato | cytosol | 35.09 | 37.27 |
| AT4G29780.1 | Thale cress | cytosol | 34.53 | 33.89 |
| TraesCS3B01G389300.1 | Wheat | mitochondrion | 19.25 | 25.82 |
| TraesCS2B01G258800.1 | Wheat | cytosol | 18.49 | 21.49 |
| TraesCS2B01G547100.1 | Wheat | mitochondrion | 16.79 | 20.27 |
| TraesCS7B01G026400.1 | Wheat | endoplasmic reticulum, plasma membrane | 14.91 | 20.26 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G129100.1 | EnsemblPlantsGene:TraesCS3B01G129100 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF113 | PFAM:PF13359 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:109860731..109862323
Molecular Weight (calculated)
57172.9 Da
IEP (calculated)
7.104
GRAVY (calculated)
-0.256
Length
530 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRNQPYVGS QHYSSQNMAD GGDLSYLDYY FEQDAVPESL PAPVNPQGSK KRGASAMEVD APQGQGEPGF KRQNSLWESM DTSGGLALHV VESSVGFGVP
101: QVQGMVTLGA EWTGGAPWVS EARGSKRQRS PSGSIETASG GSNEDGRSEM VDESVALATM TGEKGVGGGG RRLWKKDRHS AWWDTASSPG YPAADFRHHF
201: RMSPSTFQVL CEQLAAAVRK EDTALRAAIP VQKRVAVCVW RLANGEPLRK VADRFAIGVS TCHKLVLDVC AAIQATVAPN VIRWPDAAAM ATNAAKFEAL
301: SGIPGIIGAV YTTHVAIIAP KHHVINYLNP RATARKSKTC YSITLQASVD ADGTFTDICV GPGAMADDQT LLLWSMNKPK LTGETLGQGM RLVGGAGYPL
401: TDWMLVPYSH QNLTWTQHEF NERVAKARAV AVTAFHKLKA RWACLQRRTE VKVDDLSVML GACCALHNIC ERSGEPFDLQ LLQGLELDLD DDNHMVANDP
501: VPSPAAGQMR DTIAHSMLHH GKVAGAGSFY
101: QVQGMVTLGA EWTGGAPWVS EARGSKRQRS PSGSIETASG GSNEDGRSEM VDESVALATM TGEKGVGGGG RRLWKKDRHS AWWDTASSPG YPAADFRHHF
201: RMSPSTFQVL CEQLAAAVRK EDTALRAAIP VQKRVAVCVW RLANGEPLRK VADRFAIGVS TCHKLVLDVC AAIQATVAPN VIRWPDAAAM ATNAAKFEAL
301: SGIPGIIGAV YTTHVAIIAP KHHVINYLNP RATARKSKTC YSITLQASVD ADGTFTDICV GPGAMADDQT LLLWSMNKPK LTGETLGQGM RLVGGAGYPL
401: TDWMLVPYSH QNLTWTQHEF NERVAKARAV AVTAFHKLKA RWACLQRRTE VKVDDLSVML GACCALHNIC ERSGEPFDLQ LLQGLELDLD DDNHMVANDP
501: VPSPAAGQMR DTIAHSMLHH GKVAGAGSFY
001: MEISSFPFPY LQDDECSHFL GLFQDMDSSP STFGLEGFNS NDNNTNQKKR PRKDDEGGGG GGGGTEVLGA VNGNNKAAFG DILATLLLLD EEAKQQQEQW
101: DFEFIKEKSL LEANHKKKVK TMDGYYNQMQ DHYSAAGETD GSRSKRARKT AVAAVVSAVA SGADTTGLAA PVPTADIASG SGSGPSHRRL WVKERTTDWW
201: DRVSRPDFPE DEFRREFRMS KSTFNLICEE LDTTVTKKNT MLRDAIPAPK RVGVCVWRLA TGAPLRHVSE RFGLGISTCH KLVIEVCRAI YDVLMPKYLL
301: WPSDSEINST KAKFESVHKI PNVVGSIYTT HIPIIAPKVH VAAYFNKRHT ERNQKTSYSI TVQGVVNADG IFTDVCIGNP GSLTDDQILE KSSLSRQRAA
401: RGMLRDSWIV GNSGFPLTDY LLVPYTRQNL TWTQHAFNES IGEIQGIATA AFERLKGRWA CLQKRTEVKL QDLPYVLGAC CVLHNICEMR KEEMLPELKF
501: EVFDDVAVPE NNIRSASAVN TRDHISHNLL HRGLAGTRTL
101: DFEFIKEKSL LEANHKKKVK TMDGYYNQMQ DHYSAAGETD GSRSKRARKT AVAAVVSAVA SGADTTGLAA PVPTADIASG SGSGPSHRRL WVKERTTDWW
201: DRVSRPDFPE DEFRREFRMS KSTFNLICEE LDTTVTKKNT MLRDAIPAPK RVGVCVWRLA TGAPLRHVSE RFGLGISTCH KLVIEVCRAI YDVLMPKYLL
301: WPSDSEINST KAKFESVHKI PNVVGSIYTT HIPIIAPKVH VAAYFNKRHT ERNQKTSYSI TVQGVVNADG IFTDVCIGNP GSLTDDQILE KSSLSRQRAA
401: RGMLRDSWIV GNSGFPLTDY LLVPYTRQNL TWTQHAFNES IGEIQGIATA AFERLKGRWA CLQKRTEVKL QDLPYVLGAC CVLHNICEMR KEEMLPELKF
501: EVFDDVAVPE NNIRSASAVN TRDHISHNLL HRGLAGTRTL
Arabidopsis Description
Nuclease [Source:UniProtKB/TrEMBL;Acc:Q84J48]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.