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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • cytosol 3
  • endoplasmic reticulum 6
  • extracellular 4
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:cytosol, secretory
BaCelLo:cytosol
EpiLoc:endoplasmic reticulum
MultiLoc:extracellular
Plant-mPloc:cytosol, endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:endoplasmic reticulum
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra004965.1-P
Bra010452.1-P
Bra012351.1-P
Bra013908.1-P
Bra013910.1-P
Bra021502.1-P
Bra021503.1-P
Bra024548.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G02080.1 Bra012351.1-P AT1G22920.1 21798944
AT4G02080.1 Bra024548.1-P AT1G22920.1 21798944
AT4G02080.1 Bra004965.1-P AT2G40380.1 21798944
AT4G02080.1 Bra021502.1-P AT3G13720.1 21798944
AT4G02080.1 Bra021503.1-P AT3G13720.1 21798944
AT4G02080.1 Bra010452.1-P AT4G25680.1 21798944
AT4G02080.1 Bra013908.1-P AT4G25680.1 21798944
AT4G02080.1 Bra013910.1-P AT4G25680.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90955 Canola endoplasmic reticulum, extracellular 100.0 100.0
CDX91807 Canola endoplasmic reticulum, extracellular 99.48 99.48
AT4G02080.1 Thale cress endoplasmic reticulum 97.93 97.93
Zm00001d040752_P001 Maize endoplasmic reticulum, extracellular 95.34 95.34
TraesCS5A01G089200.1 Wheat golgi 95.34 95.34
TraesCS3A01G193800.1 Wheat golgi 95.34 95.34
TraesCS3B01G221700.1 Wheat endoplasmic reticulum, extracellular 95.34 95.34
EES00709 Sorghum endoplasmic reticulum, extracellular 95.34 95.34
TraesCS3D01G196200.1 Wheat endoplasmic reticulum, extracellular 94.82 94.82
TraesCS5D01G101300.1 Wheat golgi 94.82 94.82
TraesCS5B01G095200.1 Wheat endoplasmic reticulum, extracellular 94.3 94.3
Os01t0338000-01 Rice plasma membrane 94.3 94.3
KXG23692 Sorghum endoplasmic reticulum, extracellular 93.78 93.78
Bra027937.1-P Field mustard endoplasmic reticulum, extracellular 94.3 93.33
PGSC0003DMT400007183 Potato endoplasmic reticulum, golgi 93.26 93.26
Os12t0560300-01 Rice plasma membrane 93.26 93.26
Solyc01g100350.2.1 Tomato plastid 93.26 93.26
Os01t0254000-01 Rice plasma membrane 93.26 93.26
Bra038169.1-P Field mustard endoplasmic reticulum, extracellular 93.78 92.82
KRG92955 Soybean endoplasmic reticulum, extracellular 92.75 92.75
KRG96730 Soybean endoplasmic reticulum 92.75 92.75
KRH33832 Soybean endoplasmic reticulum 92.75 92.75
KRH68446 Soybean endoplasmic reticulum 92.75 92.75
EES02699 Sorghum endoplasmic reticulum, extracellular 92.23 92.23
Zm00001d040278_P001 Maize extracellular 92.23 92.23
TraesCS3B01G203800.1 Wheat endoplasmic reticulum 91.71 91.71
Bra018576.1-P Field mustard endoplasmic reticulum, golgi 91.71 91.71
TraesCS3A01G172900.1 Wheat golgi 91.71 91.71
HORVU3Hr1G035000.2 Barley plasma membrane 91.71 91.71
VIT_16s0013g00170.t01 Wine grape cytosol 50.26 89.81
PGSC0003DMT400068658 Potato endoplasmic reticulum, extracellular 88.6 88.6
Solyc01g060130.2.1 Tomato endoplasmic reticulum, extracellular 88.08 88.08
TraesCS3D01G179300.1 Wheat endoplasmic reticulum, extracellular 91.71 88.06
EES15193 Sorghum endoplasmic reticulum 79.27 78.46
KXG28257 Sorghum endoplasmic reticulum 78.24 77.84
TraesCS7B01G236300.1 Wheat cytosol 77.72 77.72
HORVU7Hr1G080190.1 Barley endoplasmic reticulum 77.2 77.2
TraesCS7D01G332100.1 Wheat endoplasmic reticulum 77.2 77.2
Zm00001d049068_P001 Maize cytosol 77.2 76.8
Os06t0225000-00 Rice endoplasmic reticulum 77.2 76.8
HORVU3Hr1G045150.3 Barley plastid 79.27 68.61
VIT_14s0060g01340.t01 Wine grape endoplasmic reticulum, extracellular 82.38 67.09
Zm00001d009211_P001 Maize mitochondrion 95.34 56.27
Bra036294.1-P Field mustard endoplasmic reticulum 98.96 46.81
Bra024440.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 32.64 34.24
Bra037841.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 32.12 33.7
Bra012918.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 31.61 33.15
Bra031680.1-P Field mustard cytosol 27.98 33.13
Bra028142.1-P Field mustard cytosol 30.57 32.07
GSMUA_Achr11P... Banana mitochondrion, plastid 34.72 27.57
Bra029979.1-P Field mustard mitochondrion 17.1 19.64
Protein Annotations
MapMan:22.4.2.1Gene3D:3.40.50.300EnsemblPlantsGene:Bra000895EnsemblPlants:Bra000895.1EnsemblPlants:Bra000895.1-PGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005794GO:GO:0006810GO:GO:0006886GO:GO:0008150
GO:GO:0009507GO:GO:0009536GO:GO:0015031GO:GO:0016192InterPro:IPR006687UniProt:M4C9L6
InterPro:P-loop_NTPasePFAM:PF00025PRINTS:PR00328PFscan:PS51422PANTHER:PTHR11711PANTHER:PTHR11711:SF165
SMART:SM00177SMART:SM00178SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPase_ARF/SARInterPro:Small_GTPase_SAR1
TIGRFAMs:TIGR00231UniParc:UPI000254060DSEG:seg:::
Description
AT4G02080 (E=1e-094) ASAR1, ATSARA1C, ATSAR2 | ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2); GTP binding
Coordinates
chrA03:-:13771778..13773398
Molecular Weight (calculated)
22025.7 Da
IEP (calculated)
7.703
GRAVY (calculated)
-0.135
Length
193 amino acids
Sequence
(BLAST)
001: MFVIDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA TVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL VDSNVRPLEV FMCSIVRKMG YGEGFKWLSQ YIK
Best Arabidopsis Sequence Match ( AT4G02080.1 )
(BLAST)
001: MFMIDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA SVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL TDSNVRPLEV FMCSIVRKMG YGEGFKWVSQ YIK
Arabidopsis Description
SAR1ASAR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5S8]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.