Factsheet for Bra027937.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

cytosol 3
endoplasmic reticulum 6
extracellular 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
MultiLoc:	extracellular
Plant-mPloc:	cytosol, endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra006619.1-P
Bra012646.1-P
Bra012647.1-P
Bra014069.1-P
Bra019445.1-P
Bra020182.1-P
Bra021502.1-P
Bra021503.1-P
Bra021504.1-P
Bra027406.1-P
Bra032216.1-P
Bra040177.1-P
Bra041043.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G56330.1	Bra014069.1-P	AT1G47260.1	21798944
AT1G56330.1	Bra032216.1-P	AT1G47260.1	21798944
AT1G56330.1	Bra041043.1-P	AT2G20130.1	21798944
AT1G56330.1	Bra021504.1-P	AT3G13710.1	21798944
AT1G56330.1	Bra027406.1-P	AT3G13710.1	21798944
AT1G56330.1	Bra021502.1-P	AT3G13720.1	21798944
AT1G56330.1	Bra021503.1-P	AT3G13720.1	21798944
AT1G56330.1	Bra019445.1-P	AT3G43230.1	21798944
AT1G56330.1	Bra012646.1-P	AT4G17720.1	21798944
AT1G56330.1	Bra012647.1-P	AT4G17720.1	21798944
AT1G56330.1	Bra040177.1-P	AT4G17720.1	21798944
AT1G56330.1	Bra002403.1-P	AT5G22290.1	21798944
AT1G56330.1	Bra006619.1-P	AT5G22290.1	21798944
AT1G56330.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59269	Canola	endoplasmic reticulum, extracellular	100.0	100.0
CDY41713	Canola	endoplasmic reticulum, extracellular	100.0	100.0
Bra038169.1-P	Field mustard	endoplasmic reticulum, extracellular	99.49	99.49
AT1G56330.1	Thale cress	endoplasmic reticulum	96.92	97.93
Bra000895.1-P	Field mustard	endoplasmic reticulum, extracellular	93.33	94.3
Bra018576.1-P	Field mustard	endoplasmic reticulum, golgi	92.82	93.78
Solyc01g100350.2.1	Tomato	plastid	91.28	92.23
PGSC0003DMT400007183	Potato	endoplasmic reticulum, golgi	91.28	92.23
KRG92955	Soybean	endoplasmic reticulum, extracellular	91.28	92.23
TraesCS5A01G089200.1	Wheat	golgi	91.28	92.23
TraesCS5D01G101300.1	Wheat	golgi	90.77	91.71
Zm00001d040752_P001	Maize	endoplasmic reticulum, extracellular	90.77	91.71
EES00709	Sorghum	endoplasmic reticulum, extracellular	90.77	91.71
TraesCS3A01G193800.1	Wheat	golgi	90.77	91.71
TraesCS3B01G221700.1	Wheat	endoplasmic reticulum, extracellular	90.77	91.71
KRH33832	Soybean	endoplasmic reticulum	90.77	91.71
KRG96730	Soybean	endoplasmic reticulum	90.77	91.71
TraesCS5B01G095200.1	Wheat	endoplasmic reticulum, extracellular	90.26	91.19
Os12t0560300-01	Rice	plasma membrane	90.26	91.19
Os01t0338000-01	Rice	plasma membrane	90.26	91.19
KXG23692	Sorghum	endoplasmic reticulum, extracellular	90.26	91.19
KRH68446	Soybean	endoplasmic reticulum	90.26	91.19
TraesCS3D01G196200.1	Wheat	endoplasmic reticulum, extracellular	90.26	91.19
Os01t0254000-01	Rice	plasma membrane	89.23	90.16
Zm00001d040278_P001	Maize	extracellular	88.21	89.12
EES02699	Sorghum	endoplasmic reticulum, extracellular	88.21	89.12
TraesCS3B01G203800.1	Wheat	endoplasmic reticulum	87.18	88.08
HORVU3Hr1G035000.2	Barley	plasma membrane	87.18	88.08
TraesCS3A01G172900.1	Wheat	golgi	87.18	88.08
VIT_16s0013g00170.t01	Wine grape	cytosol	48.72	87.96
PGSC0003DMT400068658	Potato	endoplasmic reticulum, extracellular	86.15	87.05
Solyc01g060130.2.1	Tomato	endoplasmic reticulum, extracellular	85.64	86.53
TraesCS3D01G179300.1	Wheat	endoplasmic reticulum, extracellular	87.18	84.58
Zm00001d049068_P001	Maize	cytosol	78.97	79.38
EES15193	Sorghum	endoplasmic reticulum	78.97	78.97
KXG28257	Sorghum	endoplasmic reticulum	78.46	78.87
HORVU7Hr1G080190.1	Barley	endoplasmic reticulum	77.44	78.24
TraesCS7B01G236300.1	Wheat	cytosol	77.44	78.24
TraesCS7D01G332100.1	Wheat	endoplasmic reticulum	76.92	77.72
Os06t0225000-00	Rice	endoplasmic reticulum	76.41	76.8
VIT_14s0060g01340.t01	Wine grape	endoplasmic reticulum, extracellular	81.03	66.67
HORVU3Hr1G045150.3	Barley	plastid	74.87	65.47
Zm00001d009211_P001	Maize	mitochondrion	90.77	54.13
Bra036294.1-P	Field mustard	endoplasmic reticulum	93.85	44.85
Bra024440.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.79	33.7
Bra012918.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.77	32.61
Bra037841.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.77	32.61
Bra028142.1-P	Field mustard	cytosol	30.26	32.07
Bra031680.1-P	Field mustard	cytosol	26.67	31.9
GSMUA_Achr11P...	Banana	mitochondrion, plastid	34.87	27.98
Bra029979.1-P	Field mustard	mitochondrion	15.9	18.45

Protein Annotations

MapMan:22.4.2.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra027937	EnsemblPlants:Bra027937.1	EnsemblPlants:Bra027937.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
GO:GO:0015031	GO:GO:0016192	InterPro:IPR006687	UniProt:M4EGM3	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51422	PANTHER:PTHR11711	PANTHER:PTHR11711:SF165	SMART:SM00177	SMART:SM00178
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF/SAR	InterPro:Small_GTPase_SAR1	TIGRFAMs:TIGR00231	UniParc:UPI00025421BB
SEG:seg	:	:	:	:	:

Description

AT1G56330 (E=9e-081) SAR1, ATSAR1, ATSARA1B, ATSAR1B | ATSAR1B (SECRETION-ASSOCIATED RAS 1 B); GTP binding

Coordinates

chrA09:+:9982082..9982995

Molecular Weight (calculated)

22091.7 Da

IEP (calculated)

7.073

GRAVY (calculated)

-0.149

Length

195 amino acids

Sequence
(BLAST)

001: MFLFDWFYGI LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFSESKKEL DALLSDEALA TVPFLILGNK IDIPYAASED ELRYHLGLTN FTTGKGKVTT AGGDSGVRPL EVFMCSIVRK MGYGEGFKWL SQYIN

Best Arabidopsis Sequence Match ( AT1G56330.1 )
(BLAST)

001: MFLFDWFYGI LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKREL DALLSDEALA TVPFLILGNK IDIPYAASED ELRYHLGLTN FTTGKGKVTL GDSGVRPLEV FMCSIVRKMG YGEGFKWLSQ YIN

Arabidopsis Description

SAR1BSAR1B [Source:UniProtKB/TrEMBL;Acc:A0A178WM97]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.