Factsheet for GSMUA_Achr11P18010_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
endoplasmic reticulum 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr1P21800_001
GSMUA_Achr3P10010_001
GSMUA_Achr3P10170_001
GSMUA_Achr3P15700_001
GSMUA_Achr4P18690_001
GSMUA_Achr5P07440_001
GSMUA_Achr5P14070_001
GSMUA_Achr5P14320_001
GSMUA_Achr6P22910_001
GSMUA_Achr7P09070_001
GSMUA_Achr7P22310_001
GSMUA_Achr8P02510_001
GSMUA_Achr8P14700_001
GSMUA_Achr8P27800_001
GSMUA_Achr8P30460_001
GSMUA_Achr9P23330_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G09180.1	GSMUA_AchrUn_...	AT4G25660.1	21798944
AT1G09180.1	GSMUA_AchrUn_...	AT4G25680.1	21798944
AT1G09180.1	GSMUA_Achr10P...	AT5G01640.1	21798944
AT1G09180.1	GSMUA_Achr3P10010_001	AT5G01640.1	21798944
AT1G09180.1	GSMUA_Achr4P18690_001	AT5G01640.1	21798944
AT1G09180.1	GSMUA_Achr5P07440_001	AT5G01640.1	21798944
AT1G09180.1	GSMUA_Achr5P14320_001	AT5G01640.1	21798944
AT1G09180.1	GSMUA_Achr7P22310_001	AT5G01640.1	21798944
AT1G09180.1	GSMUA_Achr8P02510_001	AT5G02040.1	21798944
AT1G56330.1	GSMUA_Achr10P...	AT2G20130.1	21798944
AT1G56330.1	GSMUA_Achr3P15700_001	AT2G20130.1	21798944
AT1G56330.1	GSMUA_Achr6P22910_001	AT2G20130.1	21798944
AT1G56330.1	GSMUA_Achr8P27800_001	AT2G20130.1	21798944
AT1G56330.1	GSMUA_Achr7P09070_001	AT3G13710.1	21798944
AT1G56330.1	GSMUA_Achr7P09070_001	AT3G13720.1	21798944
AT1G56330.1	GSMUA_Achr1P21800_001	AT3G43230.1	21798944
AT1G56330.1	GSMUA_Achr3P10170_001	AT3G43230.1	21798944
AT1G56330.1	GSMUA_Achr8P30460_001	AT3G43230.1	21798944
AT1G56330.1	GSMUA_AchrUn_...	AT3G43230.1	21798944
AT1G56330.1	GSMUA_AchrUn_...	AT3G43230.1	21798944
AT1G56330.1	GSMUA_Achr5P14070_001	AT4G17720.1	21798944
AT1G56330.1	GSMUA_Achr8P14700_001	AT4G17720.1	21798944
AT1G56330.1	GSMUA_Achr9P23330_001	AT4G17720.1	21798944
AT1G56330.1	GSMUA_AchrUn_...	AT4G17720.1	21798944
AT1G56330.1	GSMUA_Achr10P...	AT5G01640.1	21798944
AT1G56330.1	GSMUA_Achr3P10010_001	AT5G01640.1	21798944
AT1G56330.1	GSMUA_Achr4P18690_001	AT5G01640.1	21798944
AT1G56330.1	GSMUA_Achr5P07440_001	AT5G01640.1	21798944
AT1G56330.1	GSMUA_Achr5P14320_001	AT5G01640.1	21798944
AT1G56330.1	GSMUA_Achr7P22310_001	AT5G01640.1	21798944
AT4G02080.1	GSMUA_Achr10P...	AT1G22920.1	21798944
AT4G02080.1	GSMUA_Achr10P...	AT1G71230.1	21798944
AT4G02080.1	GSMUA_Achr7P09070_001	AT3G13720.1	21798944
AT4G02080.1	GSMUA_AchrUn_...	AT4G25680.1	21798944
AT4G02080.1	GSMUA_Achr10P...	AT5G01640.1	21798944
AT4G02080.1	GSMUA_Achr3P10010_001	AT5G01640.1	21798944
AT4G02080.1	GSMUA_Achr4P18690_001	AT5G01640.1	21798944
AT4G02080.1	GSMUA_Achr5P07440_001	AT5G01640.1	21798944
AT4G02080.1	GSMUA_Achr5P14320_001	AT5G01640.1	21798944
AT4G02080.1	GSMUA_Achr7P22310_001	AT5G01640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P01760_001	Banana	endoplasmic reticulum, extracellular	28.4	35.75
GSMUA_Achr8P06460_001	Banana	endoplasmic reticulum, extracellular	28.4	35.75
KRH68446	Soybean	endoplasmic reticulum	28.4	35.75
CDY65544	Canola	endoplasmic reticulum, extracellular	27.98	35.6
Solyc01g100350.2.1	Tomato	plastid	27.98	35.23
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	27.98	35.23
GSMUA_Achr8P10500_001	Banana	endoplasmic reticulum, extracellular	27.98	35.23
KRG96730	Soybean	endoplasmic reticulum	27.98	35.23
PGSC0003DMT400007183	Potato	endoplasmic reticulum, golgi	27.98	35.23
AT3G62560.1	Thale cress	endoplasmic reticulum	27.98	35.23
Bra038169.1-P	Field mustard	endoplasmic reticulum, extracellular	27.98	34.87
Bra027937.1-P	Field mustard	endoplasmic reticulum, extracellular	27.98	34.87
CDY59269	Canola	endoplasmic reticulum, extracellular	27.98	34.87
CDY39001	Canola	endoplasmic reticulum, extracellular	27.98	34.87
CDY41713	Canola	endoplasmic reticulum, extracellular	27.98	34.87
KRH33832	Soybean	endoplasmic reticulum	27.57	34.72
PGSC0003DMT400068658	Potato	endoplasmic reticulum, extracellular	27.57	34.72
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	27.57	34.72
Solyc01g060130.2.1	Tomato	endoplasmic reticulum, extracellular	27.57	34.72
AT1G09180.1	Thale cress	extracellular	27.57	34.72
CDY22027	Canola	endoplasmic reticulum, extracellular	27.57	34.72
AT1G56330.1	Thale cress	endoplasmic reticulum	27.57	34.72
AT4G02080.1	Thale cress	endoplasmic reticulum	27.57	34.72
Bra000895.1-P	Field mustard	endoplasmic reticulum, extracellular	27.57	34.72
CDX90955	Canola	endoplasmic reticulum, extracellular	27.57	34.72
CDX91807	Canola	endoplasmic reticulum, extracellular	27.57	34.72
CDY31105	Canola	endoplasmic reticulum, golgi	27.16	34.2
CDX95000	Canola	endoplasmic reticulum, golgi	27.16	34.2
Bra018576.1-P	Field mustard	endoplasmic reticulum, golgi	27.16	34.2
CDX93520	Canola	endoplasmic reticulum, golgi	27.16	34.2
KRG92955	Soybean	endoplasmic reticulum, extracellular	27.16	34.2
CDY32159	Canola	endoplasmic reticulum, golgi	26.75	33.68
GSMUA_Achr9P21350_001	Banana	endoplasmic reticulum, extracellular	26.34	33.16
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	28.4	32.55
VIT_14s0060g01340.t01	Wine grape	endoplasmic reticulum, extracellular	27.16	27.85
AT1G02620.1	Thale cress	endoplasmic reticulum	12.76	25.41
VIT_16s0013g00170.t01	Wine grape	cytosol	11.11	25.0
GSMUA_Achr2P02120_001	Banana	cytosol	28.4	24.56
GSMUA_Achr6P23020_001	Banana	cytosol	16.87	22.28
GSMUA_Achr1P22490_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	16.87	22.28
GSMUA_Achr8P30960_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	16.46	21.74
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	15.23	20.11
Bra036294.1-P	Field mustard	endoplasmic reticulum	27.57	16.42
CDY07095	Canola	endoplasmic reticulum	27.57	16.38

Protein Annotations

EnsemblPlants:GSMUA_Achr11P18010_001	EnsemblPlants:GSMUA_Achr11T18010_001	EnsemblPlantsGene:GSMUA_Achr11G18010_001	PANTHER:PTHR11711	PANTHER:PTHR11711:SF165	UniParc:UPI00029691D3
UniProt:M0RT81	MapMan:35.2	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G18010_001]

Coordinates

chr11:+:19513008..19518530

Molecular Weight (calculated)

27415.6 Da

IEP (calculated)

9.146

GRAVY (calculated)

-0.302

Length

243 amino acids

Sequence
(BLAST)

001: MPFFLWRGSA EGHAVSRSSS RLLFIWIRFF PNSARQPLFG LPFCFFSPLI DDFRRLDRGF HLGTTATARS VLFRLNSGEI SPRFDGSGRL GCFSSTASST
101: QKEAKKILLL GLDNARNDDA APYVPPLAQH QPTSEELSIG KIQFNAFDLV SLRHTKTELF WGCFARFGEW SFCNTAACSN LHFYKQNDSK PRQNRLSTLA
201: NIPFLLLGNK IDIPYAESEE ELCFPSRPEQ VHNRKGKGQP CGL

Best Arabidopsis Sequence Match ( AT3G62560.1 )
(BLAST)

001: MFLVDWFYGV LATLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA NVPFLILGNK IDIPYAASED ELRYHLGLTS FTTGKGKVNL AGTNVRPLEV FMCSIVRKMG YGEGFKWVSQ YID

Arabidopsis Description

Putative Sar1 GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VYP7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.