Factsheet for GSMUA_Achr2P02120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P06460_001	Banana	endoplasmic reticulum, extracellular	66.9	97.41
GSMUA_Achr2P01760_001	Banana	endoplasmic reticulum, extracellular	66.55	96.89
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	65.84	95.85
GSMUA_Achr8P10500_001	Banana	endoplasmic reticulum, extracellular	64.77	94.3
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	61.57	89.64
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	66.19	87.74
GSMUA_Achr9P21350_001	Banana	endoplasmic reticulum, extracellular	54.45	79.27
GSMUA_Achr1P22490_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.71	33.15
GSMUA_Achr8P30960_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.35	32.61
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.0	32.07
GSMUA_Achr6P23020_001	Banana	cytosol	20.64	31.52
GSMUA_Achr11P...	Banana	mitochondrion, plastid	24.56	28.4

Protein Annotations

MapMan:22.4.2.1	Gene3D:3.40.50.300	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016192
EnsemblPlantsGene:GSMUA_Achr2G02120_001	EnsemblPlants:GSMUA_Achr2P02120_001	EnsemblPlants:GSMUA_Achr2T02120_001	InterPro:IPR006687	UniProt:M0S4F3	InterPro:P-loop_NTPase
PFAM:PF00025	PRINTS:PR00328	PFscan:PS51422	PANTHER:PTHR11711	PANTHER:PTHR11711:SF165	SMART:SM00177
SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF/SAR	InterPro:Small_GTPase_SAR1	TIGRFAMs:TIGR00231
UniParc:UPI0002955B13	SEG:seg	:	:	:	:

Description

GTP-binding protein SAR1A [Source:GMGC_GENE;Acc:GSMUA_Achr2G02120_001]

Coordinates

chr2:+:7977751..7981223

Molecular Weight (calculated)

31342.7 Da

IEP (calculated)

7.547

GRAVY (calculated)

-0.141

Length

281 amino acids

Sequence
(BLAST)

001: MFQVSNLKDP APPPEPFACD SSPYLGSIPL LLPSHRRDFC LISGVLVGDF GSEPIPTAGS VLFRPESGEI SRRSDRSSRV RGGSTPAAMF LVDWFYGVLA
101: SLGLWQKEAK ILFLGLDNAG KTTLLHMLKD ERLVQHQPTQ YPTSEELSIG KIKFKAFDLG GHQIARRVWK DYYAKVDAVV YLVDAFDKER FAESKKELDA
201: LLSDDALANV PFLILGNKID IPYAASEDEL RYHLGLSNFT TGKGKVNLVD SNVRPLEVFM CSIVRKMGYG DGFKWLSQYI K

Best Arabidopsis Sequence Match ( AT4G02080.1 )
(BLAST)

001: MFMIDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA SVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL TDSNVRPLEV FMCSIVRKMG YGEGFKWVSQ YIK

Arabidopsis Description

SAR1ASAR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5S8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.