Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr3P19960_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G37680.1 | GSMUA_Achr3P19960_001 | AT1G14340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05578 | Sorghum | cytosol | 91.3 | 91.3 |
| KRH72981 | Soybean | cytosol | 91.3 | 91.3 |
| KRH17349 | Soybean | cytosol | 91.3 | 91.3 |
| PGSC0003DMT400040524 | Potato | cytosol, plastid | 80.98 | 90.3 |
| Os02t0732500-01 | Rice | plasma membrane | 90.22 | 90.22 |
| Solyc11g011040.1.1 | Tomato | plasma membrane | 89.67 | 89.67 |
| TraesCS6D01G274800.1 | Wheat | cytosol | 89.13 | 89.13 |
| TraesCS6B01G324400.2 | Wheat | cytosol | 89.13 | 89.13 |
| TraesCS6A01G293900.1 | Wheat | cytosol | 89.13 | 89.13 |
| HORVU6Hr1G073370.2 | Barley | cytosol | 88.59 | 88.59 |
| Bra028142.1-P | Field mustard | cytosol | 87.5 | 87.5 |
| AT5G37680.1 | Thale cress | cytosol | 87.5 | 87.5 |
| GSMUA_Achr8P30960_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 83.15 | 83.15 |
| VIT_14s0006g01090.t01 | Wine grape | cytosol | 74.46 | 83.03 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 80.43 | 80.43 |
| GSMUA_Achr1P22490_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 78.26 | 78.26 |
| Zm00001d000379_P002 | Maize | mitochondrion | 91.3 | 74.34 |
| Zm00001d017945_P002 | Maize | mitochondrion | 77.72 | 73.33 |
| CDY01715 | Canola | cytosol | 77.72 | 63.56 |
| CDY01716 | Canola | cytosol | 77.72 | 63.56 |
| CDX74569 | Canola | cytosol | 77.72 | 63.27 |
| GSMUA_Achr9P21350_001 | Banana | endoplasmic reticulum, extracellular | 33.15 | 31.61 |
| GSMUA_Achr8P10500_001 | Banana | endoplasmic reticulum, extracellular | 32.61 | 31.09 |
| GSMUA_Achr2P01760_001 | Banana | endoplasmic reticulum, extracellular | 32.07 | 30.57 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular | 31.52 | 30.05 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular | 31.52 | 30.05 |
| GSMUA_Achr8P06460_001 | Banana | endoplasmic reticulum, extracellular | 31.52 | 30.05 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular | 30.98 | 26.89 |
| GSMUA_Achr2P02120_001 | Banana | cytosol | 31.52 | 20.64 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 22.28 | 16.87 |
Protein Annotations
| MapMan:26.10.2.4 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009987 | GO:GO:0051607 |
| EnsemblPlantsGene:GSMUA_Achr6G23020_001 | EnsemblPlants:GSMUA_Achr6P23020_001 | EnsemblPlants:GSMUA_Achr6T23020_001 | InterPro:IPR024156 | UniProt:M0T9F0 | InterPro:P-loop_NTPase |
| PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF303 | SMART:SM00175 |
| SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR |
| TIGRFAMs:TIGR00231 | UniParc:UPI00029693B3 | : | : | : | : |
Description
ADP-ribosylation factor-like protein 8A [Source:GMGC_GENE;Acc:GSMUA_Achr6G23020_001]
Coordinates
chr6:-:22486388..22499091
Molecular Weight (calculated)
20768.6 Da
IEP (calculated)
8.637
GRAVY (calculated)
-0.014
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLWDSFLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNAIA TGGYSEDMIP TVGFNMRKVT KGNVTIKLWD LGGQRRFRTM WERYCRGVSA ILYVVDAADR
101: DSVPISKSEL HELLMKPSLS GIPLLVLGNK IDKSEALSQQ ALVDLLGLEH IKDREVCCHM ISCKESVNID MVIDWLIKHA RKAK
101: DSVPISKSEL HELLMKPSLS GIPLLVLGNK IDKSEALSQQ ALVDLLGLEH IKDREVCCHM ISCKESVNID MVIDWLIKHA RKAK
001: MGLWDSLLNW LRSLFFKQEM ELSLVGLQNA GKTSLVNAIA TGGYSEDMIP TVGFNMRKVT KGNVTIKIWD LGGQRRFRTM WERYCRGVSA IVYVIDAADR
101: DSVPISRSEL NDLLTKPSLN GIPLLILGNK IDKSEALSKQ ALVDQLGLES VTDREVCCYM ISCKDSINID AVIDWLIKHS RTAT
101: DSVPISRSEL NDLLTKPSLN GIPLLILGNK IDKSEALSKQ ALVDQLGLES VTDREVCCYM ISCKDSINID AVIDWLIKHS RTAT
Arabidopsis Description
ARL8CADP-ribosylation factor-like protein 8c [Source:UniProtKB/Swiss-Prot;Acc:Q8W4C8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.