Factsheet for GSMUA_Achr1P22490_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

plastid 1
cytosol 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43583	Canola	cytosol	38.04	92.11
GSMUA_Achr8P30960_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	91.85	91.85
PGSC0003DMT400055238	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	89.13	89.13
KRH77133	Soybean	endoplasmic reticulum	88.59	88.59
PGSC0003DMT400008577	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	88.59	88.59
Solyc02g064640.2.1	Tomato	extracellular	88.59	88.59
Solyc02g092330.2.1	Tomato	plastid	88.59	88.59
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	88.04	88.04
KRH28350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	88.04	88.04
KRH58117	Soybean	endoplasmic reticulum	88.04	88.04
PGSC0003DMT400023482	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	87.5	87.5
AT3G49870.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.96	86.96
Solyc03g043960.2.1	Tomato	plastid	86.96	86.96
VIT_00s0601g00030.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.96	86.96
CDY23031	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.41	86.41
AT5G67560.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.41	86.41
CDY02106	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.41	86.41
Os03t0200800-01	Rice	plasma membrane	86.41	86.41
VIT_03s0091g00970.t01	Wine grape	cytosol	86.41	86.41
Bra012918.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.41	86.41
CDY08727	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.33	85.33
EER92687	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.33	85.33
TraesCS4A01G045000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.33	85.33
TraesCS4B01G260300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.33	85.33
TraesCS4D01G260100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.33	85.33
Bra024440.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.33	85.33
CDY18665	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.78	84.78
CDY36501	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.78	84.78
Zm00001d048155_P001	Maize	extracellular	84.24	84.24
Bra037841.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.24	84.24
CDX81307	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.24	84.24
Zm00001d028112_P001	Maize	extracellular	82.07	82.07
GSMUA_Achr6P23020_001	Banana	cytosol	78.26	78.26
KRG91118	Soybean	extracellular	51.63	75.4
AT3G49860.1	Thale cress	cytosol	69.57	72.73
VIT_15s0024g01360.t01	Wine grape	cytosol	17.39	66.67
CDY06369	Canola	cytosol	65.22	65.93
Bra031680.1-P	Field mustard	cytosol	57.61	65.03
HORVU4Hr1G070410.2	Barley	cytosol	85.33	64.88
CDX68554	Canola	cytosol	41.3	58.91
Bra029979.1-P	Field mustard	mitochondrion	35.87	39.29
GSMUA_Achr2P01760_001	Banana	endoplasmic reticulum, extracellular	34.24	32.64
GSMUA_Achr9P21350_001	Banana	endoplasmic reticulum, extracellular	34.24	32.64
GSMUA_Achr8P10500_001	Banana	endoplasmic reticulum, extracellular	33.7	32.12
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	33.15	31.61
GSMUA_Achr8P06460_001	Banana	endoplasmic reticulum, extracellular	33.15	31.61
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	32.61	31.09
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	33.15	28.77
GSMUA_Achr2P02120_001	Banana	cytosol	33.15	21.71
GSMUA_Achr11P...	Banana	mitochondrion, plastid	22.28	16.87

Protein Annotations

MapMan:26.10.2.4	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr1G22490_001	EnsemblPlants:GSMUA_Achr1P22490_001	EnsemblPlants:GSMUA_Achr1T22490_001	InterPro:IPR024156
UniProt:M0S257	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF293	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00029672F1	:	:

Description

ADP-ribosylation factor-like protein 8B [Source:GMGC_GENE;Acc:GSMUA_Achr1G22490_001]

Coordinates

chr1:+:16972418..16975918

Molecular Weight (calculated)

20747.2 Da

IEP (calculated)

8.488

GRAVY (calculated)

-0.125

Length

184 amino acids

Sequence
(BLAST)

001: MGWWEALLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVIA TGGYCEDMIP TVGFNMRKLT KGNVTIKLWD LGGQPRFRSM WERYCRAVSA IVYVVDAADR
101: DNLPTSRSEL HDLLSKPSLS GIPLLVLGNK IDKPETMSKQ GFTDEMGLRS IADREVCCFM ISCKNSTNID SVIHWLVKHS KSTN

Best Arabidopsis Sequence Match ( AT5G67560.1 )
(BLAST)

001: MGLWDALLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGSVTIKLWD LGGQPRFRSM WERYCRSVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLN GIPLLVLGNK IDKPGALSKE ALTDEMGLKS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSSN

Arabidopsis Description

ARL8BADP-ribosylation factor-like protein 8b [Source:UniProtKB/Swiss-Prot;Acc:Q93Y31]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.