Factsheet for HORVU4Hr1G070410.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G260100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	75.62	99.46
TraesCS4B01G260300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	75.62	99.46
TraesCS4A01G045000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	75.62	99.46
Os03t0200800-01	Rice	plasma membrane	74.79	98.37
EER92687	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	73.97	97.28
Zm00001d048155_P001	Maize	extracellular	72.73	95.65
Zm00001d028112_P001	Maize	extracellular	71.49	94.02
CDY43583	Canola	cytosol	28.93	92.11
GSMUA_Achr8P30960_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.18	89.67
PGSC0003DMT400008577	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.53	87.5
Solyc02g092330.2.1	Tomato	plastid	66.53	87.5
VIT_00s0601g00030.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.53	87.5
PGSC0003DMT400055238	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.12	86.96
KRH77133	Soybean	endoplasmic reticulum	66.12	86.96
Solyc02g064640.2.1	Tomato	extracellular	65.7	86.41
KRH58117	Soybean	endoplasmic reticulum	65.7	86.41
KRH28350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.7	86.41
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.29	85.87
AT3G49870.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.88	85.33
GSMUA_Achr1P22490_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.88	85.33
Bra012918.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.88	85.33
CDY23031	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.88	85.33
CDY02106	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.88	85.33
Solyc03g043960.2.1	Tomato	plastid	64.46	84.78
PGSC0003DMT400023482	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.46	84.78
Bra024440.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.05	84.24
CDY08727	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.05	84.24
CDY36501	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.64	83.7
AT5G67560.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.64	83.7
CDY18665	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.64	83.7
Bra037841.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.22	83.15
VIT_03s0091g00970.t01	Wine grape	cytosol	62.81	82.61
CDX81307	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.4	82.07
HORVU6Hr1G073370.2	Barley	cytosol	57.85	76.09
KRG91118	Soybean	extracellular	38.84	74.6
AT3G49860.1	Thale cress	cytosol	52.07	71.59
VIT_15s0024g01360.t01	Wine grape	cytosol	13.22	66.67
CDY06369	Canola	cytosol	49.59	65.93
Bra031680.1-P	Field mustard	cytosol	43.8	65.03
CDX68554	Canola	cytosol	30.58	57.36
Bra029979.1-P	Field mustard	mitochondrion	27.27	39.29
HORVU3Hr1G035000.2	Barley	plasma membrane	25.62	32.12
HORVU7Hr1G080190.1	Barley	endoplasmic reticulum	23.55	29.53
HORVU3Hr1G045150.3	Barley	plastid	23.14	25.11

Protein Annotations

MapMan:26.10.2.4	Gene3D:3.40.50.300	UniProt:A0A287PJM2	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	EnsemblPlantsGene:HORVU4Hr1G070410	EnsemblPlants:HORVU4Hr1G070410.2
InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF293	SMART:SM00173	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000B4777E9	SEG:seg

Description

No Description!

Coordinates

chrchr4H:-:575334419..575338725

Molecular Weight (calculated)

21367.1 Da

IEP (calculated)

9.814

GRAVY (calculated)

-0.041

Length

242 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XSTPRAAAMG FWEAFLNWLR SLFFKQEMEL SLIGLQNAGK TSLVNVIATG
101: GFSEDMIPTV GFNMRKVTKG NVTIKLWDLG GQPRFRSMWE RYCRAVSAIV YVVDAADREN MAIAKSELHD LLSKPSLTGI PLLVIGNKID KPEAFPKQSF
201: TEVMGLKAMT DREVACFMIS CKNSTNIDSV IDWLVKHSKK KN

Best Arabidopsis Sequence Match ( AT3G49870.1 )
(BLAST)

001: MGLLEAFLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGNVTIKLWD LGGQPRFRSM WERYCRAVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLN GIPLLVLGNK IDKPGALSKE ALTDEMGLTS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSKN

Arabidopsis Description

ARL8AADP-ribosylation factor-like protein 8a [Source:UniProtKB/Swiss-Prot;Acc:Q8VY57]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.