CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43583	Canola	cytosol	28.68	48.68
CDY06369	Canola	cytosol	68.22	48.35
CDY23031	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.57	44.57
CDY02106	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.57	44.57
AT3G49870.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.79	44.02
Solyc02g064640.2.1	Tomato	extracellular	62.79	44.02
VIT_00s0601g00030.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.02	43.48
PGSC0003DMT400008577	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.02	43.48
CDY08727	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.24	42.93
GSMUA_Achr8P30960_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.24	42.93
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.24	42.93
KRH28350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.24	42.93
CDY36501	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.24	42.93
KRH58117	Soybean	endoplasmic reticulum	61.24	42.93
CDY18665	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.24	42.93
PGSC0003DMT400055238	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.47	42.39
Solyc02g092330.2.1	Tomato	plastid	60.47	42.39
KRH77133	Soybean	endoplasmic reticulum	59.69	41.85
Solyc03g043960.2.1	Tomato	plastid	59.69	41.85
CDX81307	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	59.69	41.85
PGSC0003DMT400023482	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	58.91	41.3
GSMUA_Achr1P22490_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	58.91	41.3
Os03t0200800-01	Rice	plasma membrane	57.36	40.22
TraesCS4A01G045000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.36	40.22
TraesCS4B01G260300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.36	40.22
TraesCS4D01G260100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.36	40.22
EER92687	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.36	40.22
Zm00001d048155_P001	Maize	extracellular	56.59	39.67
Zm00001d028112_P001	Maize	extracellular	55.81	39.13
AT3G49860.1	Thale cress	cytosol	49.61	36.36
Bra029979.1-P	Field mustard	mitochondrion	43.41	33.33
CDY01715	Canola	cytosol	54.26	31.11
CDY01716	Canola	cytosol	54.26	31.11
CDX74569	Canola	cytosol	54.26	30.97
HORVU4Hr1G070410.2	Barley	cytosol	57.36	30.58
CDY37846	Canola	cytosol, mitochondrion, nucleus, plastid	24.03	24.22
CDY65544	Canola	endoplasmic reticulum, extracellular	25.58	17.28
CDY22027	Canola	endoplasmic reticulum, extracellular	25.58	17.1
CDY31105	Canola	endoplasmic reticulum, golgi	25.58	17.1
CDY32159	Canola	endoplasmic reticulum, golgi	25.58	17.1
CDX95000	Canola	endoplasmic reticulum, golgi	25.58	17.1
CDX93520	Canola	endoplasmic reticulum, golgi	25.58	17.1
CDX91807	Canola	endoplasmic reticulum, extracellular	25.58	17.1
CDX90955	Canola	endoplasmic reticulum, extracellular	25.58	17.1
CDY59269	Canola	endoplasmic reticulum, extracellular	25.58	16.92
CDY39001	Canola	endoplasmic reticulum, extracellular	25.58	16.92
CDY41713	Canola	endoplasmic reticulum, extracellular	25.58	16.92
CDY22028	Canola	nucleus	13.18	8.29
CDY07095	Canola	endoplasmic reticulum	25.58	8.07

Protein Annotations

EnsemblPlants:CDX68554	EnsemblPlantsGene:GSBRNA2T00126128001	Gene3D:3.40.50.300	GO:A0A078BXM3	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	InterPro:P-loop_NTPase	InterPro:Small_GTPase_ARF/SAR	PANTHER:PTHR11711	PANTHER:PTHR11711:SF231
PFAM:PF00025	ProteinID:CDX68554	ProteinID:CDX68554.1	SUPFAM:SSF52540	UniParc:UPI0004EDEAB8	MapMan:35.1

Description

BnaC01g26320D

Coordinates

chrLK031788:-:4071815..4072569

Molecular Weight (calculated)

14637.8 Da

IEP (calculated)

8.653

GRAVY (calculated)

-0.095

Length

129 amino acids

Sequence
(BLAST)

001: MGWWEASLNW LRRASKCGKT SLINVVENVG YSEDLDPIIG FHMREVIKGN VTFKIWDASG QSRFRSSWER FVHVGVLLSC CRYVDAADLD NLFISKNELH
101: KLCKTLLNGI PLLVLGNKMD EPGLSLKKP

Best Arabidopsis Sequence Match ( AT3G49870.1 )
(BLAST)

001: MGLLEAFLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGNVTIKLWD LGGQPRFRSM WERYCRAVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLN GIPLLVLGNK IDKPGALSKE ALTDEMGLTS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSKN

Arabidopsis Description

ARL8AADP-ribosylation factor-like protein 8a [Source:UniProtKB/Swiss-Prot;Acc:Q8VY57]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.