Factsheet for AT3G49870.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

plastid 1
cytosol 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23031	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	97.83	97.83
CDY02106	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	97.83	97.83
Bra012918.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	97.83	97.83
AT5G67560.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	96.2	96.2
VIT_00s0601g00030.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	93.48	93.48
Solyc02g064640.2.1	Tomato	extracellular	93.48	93.48
KRH58117	Soybean	endoplasmic reticulum	92.93	92.93
KRH28350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	92.93	92.93
PGSC0003DMT400008577	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	92.93	92.93
GSMUA_Achr8P30960_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	91.85	91.85
KRH77133	Soybean	endoplasmic reticulum	91.85	91.85
PGSC0003DMT400055238	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	91.3	91.3
Solyc02g092330.2.1	Tomato	plastid	90.76	90.76
Solyc03g043960.2.1	Tomato	plastid	89.67	89.67
PGSC0003DMT400023482	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	89.13	89.13
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	88.59	88.59
GSMUA_Achr1P22490_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.96	86.96
Os03t0200800-01	Rice	plasma membrane	85.87	85.87
TraesCS4A01G045000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.33	85.33
TraesCS4B01G260300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.33	85.33
TraesCS4D01G260100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.33	85.33
EER92687	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.78	84.78
Zm00001d048155_P001	Maize	extracellular	83.15	83.15
Zm00001d028112_P001	Maize	extracellular	81.52	81.52
AT3G49860.1	Thale cress	cytosol	77.72	81.25
AT5G37680.1	Thale cress	cytosol	78.8	78.8
CDY06369	Canola	cytosol	72.28	73.08
Bra031680.1-P	Field mustard	cytosol	64.67	73.01
HORVU4Hr1G070410.2	Barley	cytosol	85.33	64.88
CDX68554	Canola	cytosol	44.02	62.79
Bra029979.1-P	Field mustard	mitochondrion	38.59	42.26
AT1G09180.1	Thale cress	extracellular	34.78	33.16
AT1G02620.1	Thale cress	endoplasmic reticulum	21.74	32.79
AT4G02080.1	Thale cress	endoplasmic reticulum	34.24	32.64
AT3G62560.1	Thale cress	endoplasmic reticulum	33.7	32.12
AT1G56330.1	Thale cress	endoplasmic reticulum	33.15	31.61
AT4G02090.1	Thale cress	cytosol, nucleus, plastid	15.22	13.86

Protein Annotations

MapMan:26.10.2.4	Gene3D:3.40.50.300	EntrezGene:824149	UniProt:A0A178VDY8	ProteinID:AEE78600.1	ArrayExpress:AT3G49870
EnsemblPlantsGene:AT3G49870	RefSeq:AT3G49870	TAIR:AT3G49870	RefSeq:AT3G49870-TAIR-G	EnsemblPlants:AT3G49870.1	TAIR:AT3G49870.1
Symbol:ATARLA1C	EMBL:AY072429	EMBL:AY114718	ProteinID:CAB66925.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005764	GO:GO:0005765	GO:GO:0005768	GO:GO:0005773	GO:GO:0005774
GO:GO:0005794	GO:GO:0005819	GO:GO:0005829	GO:GO:0005856	GO:GO:0005886	GO:GO:0006950
GO:GO:0007049	GO:GO:0007059	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009506	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016020	GO:GO:0031902
GO:GO:0051301	GO:GO:0051607	InterPro:IPR024156	RefSeq:NP_190556.2	ProteinID:OAP04647.1	InterPro:P-loop_NTPase
PFAM:PF00025	PO:PO:0000005	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0005052
PO:PO:0025195	PO:PO:0025281	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF293
UniProt:Q8VY57	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00000A2046	:	:

Description

ARL8AADP-ribosylation factor-like protein 8a [Source:UniProtKB/Swiss-Prot;Acc:Q8VY57]

Coordinates

chr3:-:18492274..18494285

Molecular Weight (calculated)

20404.8 Da

IEP (calculated)

7.935

GRAVY (calculated)

-0.029

Length

184 amino acids

Sequence
(BLAST)

001: MGLLEAFLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGNVTIKLWD LGGQPRFRSM WERYCRAVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLN GIPLLVLGNK IDKPGALSKE ALTDEMGLTS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSKN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.