Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 2
- endoplasmic reticulum 5
- extracellular 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G02080.1 | Thale cress | endoplasmic reticulum | 94.82 | 94.82 |
| PGSC0003DMT400007183 | Potato | endoplasmic reticulum, golgi | 94.3 | 94.3 |
| Solyc01g100350.2.1 | Tomato | plastid | 94.3 | 94.3 |
| Zm00001d040752_P001 | Maize | endoplasmic reticulum, extracellular | 93.78 | 93.78 |
| EES00709 | Sorghum | endoplasmic reticulum, extracellular | 93.78 | 93.78 |
| TraesCS3A01G193800.1 | Wheat | golgi | 93.26 | 93.26 |
| TraesCS3B01G221700.1 | Wheat | endoplasmic reticulum, extracellular | 93.26 | 93.26 |
| TraesCS5A01G089200.1 | Wheat | golgi | 93.26 | 93.26 |
| TraesCS3D01G196200.1 | Wheat | endoplasmic reticulum, extracellular | 92.75 | 92.75 |
| AT1G56330.1 | Thale cress | endoplasmic reticulum | 92.75 | 92.75 |
| Os01t0338000-01 | Rice | plasma membrane | 92.75 | 92.75 |
| TraesCS5D01G101300.1 | Wheat | golgi | 92.75 | 92.75 |
| KXG23692 | Sorghum | endoplasmic reticulum, extracellular | 92.75 | 92.75 |
| KRG96730 | Soybean | endoplasmic reticulum | 92.23 | 92.23 |
| KRH68446 | Soybean | endoplasmic reticulum | 92.23 | 92.23 |
| TraesCS5B01G095200.1 | Wheat | endoplasmic reticulum, extracellular | 92.23 | 92.23 |
| Os12t0560300-01 | Rice | plasma membrane | 91.71 | 91.71 |
| Zm00001d040278_P001 | Maize | extracellular | 91.19 | 91.19 |
| Os01t0254000-01 | Rice | plasma membrane | 91.19 | 91.19 |
| EES02699 | Sorghum | endoplasmic reticulum, extracellular | 91.19 | 91.19 |
| PGSC0003DMT400068658 | Potato | endoplasmic reticulum, extracellular | 91.19 | 91.19 |
| Solyc01g060130.2.1 | Tomato | endoplasmic reticulum, extracellular | 90.67 | 90.67 |
| TraesCS3A01G172900.1 | Wheat | golgi | 90.16 | 90.16 |
| KRG92955 | Soybean | endoplasmic reticulum, extracellular | 90.16 | 90.16 |
| KRH33832 | Soybean | endoplasmic reticulum | 90.16 | 90.16 |
| HORVU3Hr1G035000.2 | Barley | plasma membrane | 90.16 | 90.16 |
| TraesCS3B01G203800.1 | Wheat | endoplasmic reticulum | 90.16 | 90.16 |
| AT1G09180.1 | Thale cress | extracellular | 88.08 | 88.08 |
| VIT_16s0013g00170.t01 | Wine grape | cytosol | 49.22 | 87.96 |
| TraesCS3D01G179300.1 | Wheat | endoplasmic reticulum, extracellular | 90.16 | 86.57 |
| EES15193 | Sorghum | endoplasmic reticulum | 81.35 | 80.51 |
| AT1G02620.1 | Thale cress | endoplasmic reticulum | 50.78 | 80.33 |
| KXG28257 | Sorghum | endoplasmic reticulum | 79.79 | 79.38 |
| Zm00001d049068_P001 | Maize | cytosol | 79.79 | 79.38 |
| TraesCS7B01G236300.1 | Wheat | cytosol | 78.76 | 78.76 |
| Os06t0225000-00 | Rice | endoplasmic reticulum | 78.76 | 78.35 |
| HORVU7Hr1G080190.1 | Barley | endoplasmic reticulum | 78.24 | 78.24 |
| TraesCS7D01G332100.1 | Wheat | endoplasmic reticulum | 77.72 | 77.72 |
| HORVU3Hr1G045150.3 | Barley | plastid | 77.2 | 66.82 |
| VIT_14s0060g01340.t01 | Wine grape | endoplasmic reticulum, extracellular | 81.35 | 66.24 |
| Zm00001d009211_P001 | Maize | mitochondrion | 93.78 | 55.35 |
| AT5G67560.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 32.12 | 33.7 |
| AT3G49870.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 32.12 | 33.7 |
| AT5G37680.1 | Thale cress | cytosol | 30.57 | 32.07 |
| AT3G49860.1 | Thale cress | cytosol | 29.02 | 31.82 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 35.23 | 27.98 |
| AT4G02090.1 | Thale cress | cytosol, nucleus, plastid | 19.17 | 18.32 |
Protein Annotations
| MapMan:22.4.2.1 | Gene3D:3.40.50.300 | EntrezGene:825430 | EntrezGene:827368 | EntrezGene:842086 | UniProt:A0A178VGR8 |
| ProteinID:AAB57799.1 | ProteinID:AAC78700.1 | ProteinID:AAG50911.1 | ProteinID:AEE33378.1 | ProteinID:AEE80364.1 | ProteinID:AEE82122.1 |
| EMBL:AK228049 | ArrayExpress:AT3G62560 | EnsemblPlantsGene:AT3G62560 | RefSeq:AT3G62560 | TAIR:AT3G62560 | RefSeq:AT3G62560-TAIR-G |
| EnsemblPlants:AT3G62560.1 | TAIR:AT3G62560.1 | EMBL:AY065357 | EMBL:AY070378 | EMBL:AY072220 | EMBL:AY085815 |
| EMBL:AY088765 | EMBL:AY096599 | EMBL:AY096699 | EMBL:AY117363 | ProteinID:CAB80701.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006888 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016192 | GO:GO:0019898 | InterPro:IPR006687 | EMBL:M95795 | RefSeq:NP_176029.1 | RefSeq:NP_191815.1 |
| RefSeq:NP_192117.1 | ProteinID:OAP00363.1 | ProteinID:OAP05036.1 | ProteinID:OAP19041.1 | InterPro:P-loop_NTPase | PFAM:PF00025 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00328 | PFscan:PS51422 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF165 | UniProt:Q8VYP7 | SMART:SM00177 |
| SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF/SAR | InterPro:Small_GTPase_SAR1 | TIGRFAMs:TIGR00231 |
| EMBL:U56929 | UniParc:UPI00000A4B12 | EMBL:Z26707 | SEG:seg | : | : |
Description
Putative Sar1 GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VYP7]
Coordinates
chr3:+:23137286..23139145
Molecular Weight (calculated)
21940.5 Da
IEP (calculated)
7.073
GRAVY (calculated)
-0.130
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLVDWFYGV LATLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA NVPFLILGNK IDIPYAASED ELRYHLGLTS FTTGKGKVNL AGTNVRPLEV FMCSIVRKMG YGEGFKWVSQ YID
101: ERFAESKKEL DALLSDESLA NVPFLILGNK IDIPYAASED ELRYHLGLTS FTTGKGKVNL AGTNVRPLEV FMCSIVRKMG YGEGFKWVSQ YID
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.