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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000699.1-P
Bra001608.1-P
Bra001900.1-P
Bra002459.1-P
Bra002821.1-P
Bra002827.1-P
Bra003118.1-P
Bra003428.1-P
Bra003438.1-P
Bra003510.1-P
Bra003797.1-P
Bra004031.1-P
Bra004190.1-P
Bra004319.1-P
Bra004644.1-P
Bra004645.1-P
Bra006662.1-P
Bra006753.1-P
Bra007149.1-P
Bra007565.1-P
Bra007576.1-P
Bra007701.1-P
Bra008154.1-P
Bra010823.1-P
Bra010975.1-P
Bra011468.1-P
Bra012303.1-P
Bra012346.1-P
Bra012496.1-P
Bra014245.1-P
Bra014328.1-P
Bra014468.1-P
Bra014767.1-P
Bra014932.1-P
Bra014934.1-P
Bra015906.1-P
Bra017426.1-P
Bra017504.1-P
Bra018618.1-P
Bra018839.1-P
Bra018971.1-P
Bra018982.1-P
Bra019106.1-P
Bra019509.1-P
Bra021172.1-P
Bra021980.1-P
Bra022104.1-P
Bra023739.1-P
Bra023834.1-P
Bra024541.1-P
Bra024774.1-P
Bra024837.1-P
Bra024892.1-P
Bra025286.1-P
Bra025713.1-P
Bra026122.1-P
Bra026439.1-P
Bra026619.1-P
Bra026757.1-P
Bra027180.1-P
Bra027204.1-P
Bra027435.1-P
Bra028933.1-P
Bra029112.1-P
Bra030154.1-P
Bra030284.1-P
Bra030378.1-P
Bra030380.1-P
Bra031210.1-P
Bra031421.1-P
Bra032329.1-P
Bra032625.1-P
Bra032666.1-P
Bra032760.1-P
Bra033219.1-P
Bra033654.1-P
Bra033788.1-P
Bra033886.1-P
Bra034582.1-P
Bra035336.1-P
Bra035407.1-P
Bra035728.1-P
Bra035784.1-P
Bra036978.1-P
Bra037901.1-P
Bra038444.1-P
Bra038591.1-P
Bra039298.1-P
Bra039299.1-P
Bra039401.1-P
Bra039402.1-P
Bra040630.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G22920.1 Bra012303.1-P AT1G02090.1 11742986
AT1G22920.1 Bra032666.1-P AT1G02090.1 11742986
AT1G22920.1 Bra033219.1-P AT1G02090.1 11742986
AT1G22920.1 Bra018618.1-P AT1G08530.1 21798944
AT1G22920.1 Bra026122.1-P AT1G15550.1 21798944
AT1G22920.1 Bra026757.1-P AT1G15550.1 21798944
AT1G22920.1 Bra025713.1-P AT1G19180.1 21798944
AT1G22920.1 Bra012346.1-P AT1G22840.1 21798944
AT1G22920.1 Bra024541.1-P AT1G22840.1 21798944
AT1G22920.1 Bra010975.1-P AT1G24625.1 21798944
AT1G22920.1 Bra012496.1-P AT1G24625.1 21798944
AT1G22920.1 Bra010823.1-P AT1G29640.1 21798944
AT1G22920.1 Bra030154.1-P AT1G29640.1 21798944
AT1G22920.1 Bra032329.1-P AT1G29640.1 21798944
AT1G22920.1 Bra014245.1-P AT1G50300.1 21798944
AT1G22920.1 Bra018839.1-P AT1G50300.1 21798944
AT1G22920.1 Bra030380.1-P AT1G52510.1 21798944
AT1G22920.1 Bra018971.1-P AT1G52540.1 21798944
AT1G22920.1 Bra030378.1-P AT1G52540.1 21798944
AT1G22920.1 Bra018982.1-P AT1G52695.1 21798944
AT1G22920.1 Bra031421.1-P AT1G61590.1 21798944
AT1G22920.1 Bra038591.1-P AT1G61590.1 21798944
AT1G22920.1 Bra004190.1-P AT1G66820.1 21798944
AT1G22920.1 Bra040630.1-P AT1G66820.1 21798944
AT1G22920.1 Bra004031.1-P AT1G68560.1 21798944
AT1G22920.1 Bra004319.1-P AT1G68560.1 21798944
AT1G22920.1 Bra035407.1-P AT1G68560.1 21798944
AT1G22920.1 Bra003797.1-P AT1G74500.1 21798944
AT1G22920.1 Bra008154.1-P AT1G74500.1 21798944
AT1G22920.1 Bra015906.1-P AT1G74500.1 21798944
AT1G22920.1 Bra014328.1-P AT2G01290.1 21798944
AT1G22920.1 Bra024892.1-P AT2G01290.1 21798944
AT1G22920.1 Bra017426.1-P AT2G02050.1 21798944
AT1G22920.1 Bra024837.1-P AT2G02050.1 21798944
AT1G22920.1 Bra026619.1-P AT2G02050.1 21798944
AT1G22920.1 Bra030284.1-P AT2G21660.1 21798944
AT1G22920.1 Bra031210.1-P AT2G21660.1 21798944
AT1G22920.1 Bra004644.1-P AT2G41730.1 21798944
AT1G22920.1 Bra004645.1-P AT2G41730.1 21798944
AT1G22920.1 Bra039298.1-P AT2G42395.1 21798944
AT1G22920.1 Bra039299.1-P AT2G42395.1 21798944
AT1G22920.1 Bra027435.1-P AT3G13440.1 21798944
AT1G22920.1 Bra039401.1-P AT3G13440.1 21798944
AT1G22920.1 Bra039402.1-P AT3G13440.1 21798944
AT1G22920.1 Bra001608.1-P AT3G15840.1 21798944
AT1G22920.1 Bra027204.1-P AT3G15840.1 21798944
AT1G22920.1 Bra021172.1-P AT3G16250.1 21798944
AT1G22920.1 Bra027180.1-P AT3G16250.1 21798944
AT1G22920.1 Bra035784.1-P AT3G20420.1 21798944
AT1G22920.1 Bra001900.1-P AT3G23050.1 21798944
AT1G22920.1 Bra033886.1-P AT3G23050.1 21798944
AT1G22920.1 Bra014932.1-P AT3G23280.1 21798944
AT1G22920.1 Bra014934.1-P AT3G23280.1 21798944
AT1G22920.1 Bra023739.1-P AT3G23280.1 21798944
AT1G22920.1 Bra025286.1-P AT3G27560.1 21798944
AT1G22920.1 Bra002459.1-P AT3G45210.1 21798944
AT1G22920.1 Bra019509.1-P AT3G47640.1 21798944
AT1G22920.1 Bra033788.1-P AT3G47640.1 21798944
AT1G22920.1 Bra007149.1-P AT3G55240.1 21798944
AT1G22920.1 Bra014767.1-P AT3G55240.1 21798944
AT1G22920.1 Bra003428.1-P AT3G60820.1 21798944
AT1G22920.1 Bra007565.1-P AT3G60820.1 21798944
AT1G22920.1 Bra014468.1-P AT3G60820.1 21798944
AT1G22920.1 Bra003438.1-P AT3G61140.1 12615944
AT1G22920.1 Bra007576.1-P AT3G61140.1 12615944
AT1G22920.1 Bra003438.1-P AT3G61140.1 9811788
AT1G22920.1 Bra007576.1-P AT3G61140.1 9811788
AT1G22920.1 Bra003510.1-P AT3G62790.1 21798944
AT1G22920.1 Bra007701.1-P AT3G62790.1 21798944
AT1G22920.1 Bra006662.1-P AT4G07950.1 21798944
AT1G22920.1 Bra024774.1-P AT4G07950.1 21798944
AT1G22920.1 Bra032625.1-P AT4G07950.1 21798944
AT1G22920.1 Bra000699.1-P AT4G10040.1 21798944
AT1G22920.1 Bra037901.1-P AT4G10040.1 21798944
AT1G22920.1 Bra032760.1-P AT4G14110.1 11701877
AT1G22920.1 Bra038444.1-P AT4G14110.1 11701877
AT1G22920.1 Bra032760.1-P AT4G14110.1 11742986
AT1G22920.1 Bra038444.1-P AT4G14110.1 11742986
AT1G22920.1 Bra019106.1-P AT4G26430.1 11742986
AT1G22920.1 Bra026439.1-P AT4G26430.1 11742986
AT1G22920.1 Bra011468.1-P AT4G33770.1 21798944
AT1G22920.1 Bra034582.1-P AT4G33770.1 21798944
AT1G22920.1 Bra036978.1-P AT4G33770.1 21798944
AT1G22920.1 Bra023834.1-P AT5G42300.1 21798944
AT1G22920.1 Bra033654.1-P AT5G42970.1 12615944
AT1G22920.1 Bra035336.1-P AT5G42970.1 12615944
AT1G22920.1 Bra021980.1-P AT5G45490.1 21798944
AT1G22920.1 Bra017504.1-P AT5G47100.1 21798944
AT1G22920.1 Bra022104.1-P AT5G47100.1 21798944
AT1G22920.1 Bra035728.1-P AT5G51170.1 21798944
AT1G22920.1 Bra003118.1-P AT5G52650.1 21798944
AT1G22920.1 Bra029112.1-P AT5G52650.1 21798944
AT1G22920.1 Bra002827.1-P AT5G56280.1 11701877
AT1G22920.1 Bra002827.1-P AT5G56280.1 11742986
AT1G22920.1 Bra002827.1-P AT5G56280.1 12615944
AT1G22920.1 Bra002827.1-P AT5G56280.1 21798944
AT1G22920.1 Bra002821.1-P AT5G56360.1 21798944
AT1G22920.1 Bra028933.1-P AT5G56360.1 21798944
AT1G22920.1 Bra006753.1-P AT5G58575.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY25761 Canola cytosol 99.44 99.44
Bra024548.1-P Field mustard cytosol 89.04 89.04
AT1G22920.1 Thale cress cytosol 87.08 86.83
VIT_03s0038g04360.t01 Wine grape cytosol 80.34 79.44
PGSC0003DMT400023896 Potato cytosol 81.18 78.75
HORVU3Hr1G054660.1 Barley cytosol 53.93 78.69
PGSC0003DMT400069203 Potato cytosol 80.9 78.47
Solyc11g017300.1.1 Tomato cytosol 80.62 78.2
HORVU7Hr1G078010.1 Barley cytosol 29.78 77.94
Solyc06g073150.2.1 Tomato cytosol 80.34 77.93
HORVU0Hr1G018470.1 Barley cytosol 53.09 77.78
HORVU6Hr1G023630.1 Barley cytosol 51.97 77.08
GSMUA_Achr10P... Banana cytosol 78.37 75.82
KRH61926 Soybean nucleus 79.49 75.67
Os04t0654700-02 Rice cytosol 75.28 74.44
TraesCS2A01G504600.1 Wheat cytosol 75.84 74.18
TraesCS2D01G505300.1 Wheat golgi, unclear 75.28 73.63
HORVU1Hr1G008160.1 Barley cytosol 31.18 73.03
Zm00001d002027_P002 Maize extracellular 74.16 72.93
HORVU0Hr1G025410.1 Barley cytosol 61.24 72.43
HORVU4Hr1G048730.1 Barley cytosol 61.24 72.19
KXG27287 Sorghum cytosol 74.44 71.05
KRH52586 Soybean cytosol, nucleus 79.21 68.95
HORVU3Hr1G113750.1 Barley cytosol 29.21 67.1
HORVU2Hr1G056160.5 Barley cytosol 30.62 64.88
HORVU2Hr1G067660.1 Barley cytosol, peroxisome 12.36 62.86
HORVU2Hr1G112000.1 Barley cytosol 67.42 60.3
HORVU3Hr1G021300.1 Barley cytosol, plastid 26.4 56.97
HORVU4Hr1G047410.2 Barley cytosol, mitochondrion, peroxisome 25.56 35.97
Bra029375.1-P Field mustard cytosol 21.91 31.33
Bra026492.1-P Field mustard cytosol 25.28 29.22
Bra009693.1-P Field mustard cytosol 25.28 29.22
Protein Annotations
EnsemblPlants:Bra012351.1EnsemblPlants:Bra012351.1-PEnsemblPlantsGene:Bra012351Gene3D:3.40.140.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR037518InterPro:JAMM/MPN+_domInterPro:MPNMEROPS:M67.A01PANTHER:PTHR10410
PANTHER:PTHR10410:SF14PFAM:PF01398PFscan:PS50249SEG:segSMART:SM00232SUPFAM:SSF102712
UniParc:UPI000254141FUniProt:M4D791MapMan:19.2.3.3.1.5:::
Description
AT1G22920 (E=1e-170) CSN5A, JAB1, AJH1 | CSN5A (COP9 SIGNALOSOME 5A)
Coordinates
chrA07:+:8296590..8298754
Molecular Weight (calculated)
39724.1 Da
IEP (calculated)
5.775
GRAVY (calculated)
-0.357
Length
356 amino acids
Sequence
(BLAST)
001: MESSSTIARK TWELENNILT VKPPADSSSD NIFHYDGAAH AKVLKEKPWA TDPNYFKRVQ ISALALLKMV VHARSGGTIE IMGLMQGKTD GDTIIVMDAF
101: ALPVEGTETR VNAQADAYEY MVEYSQTNKL AGRLENVVGW YHSHPGYGCW LSGIDVSTQM LNQQYQEPFL AVVIDPTRTV SAGKVEIGAF RTYPEGHKIS
201: DDHVSEYQTI PLNKIEDFGV HCKQYYSLDI TYFKSSLDSH LLDLLWNKYW VNTLSSSPLL GNGDYVAGQI SDLAEKLDQA ESQLVQSWFG GKKASLHKKK
301: KDELPLAKIT RDSAKITIEQ VHGLMSQVIK DILFISARQS DKTPSDPTDP EPMITS
Best Arabidopsis Sequence Match ( AT1G22920.1 )
(BLAST)
001: MEGSSSAIAR KTWELENNIL PVEPTDSASD SIFHYDDASQ AKIQQEKPWA SDPNYFKRVH ISALALLKMV VHARSGGTIE IMGLMQGKTE GDTIIVMDAF
101: ALPVEGTETR VNAQSDAYEY MVEYSQTSKL AGRLENVVGW YHSHPGYGCW LSGIDVSTQM LNQQYQEPFL AVVIDPTRTV SAGKVEIGAF RTYPEGHKIS
201: DDHVSEYQTI PLNKIEDFGV HCKQYYSLDI TYFKSSLDSH LLDLLWNKYW VNTLSSSPLL GNGDYVAGQI SDLAEKLEQA ESQLANSRYG GIAPAGHQRR
301: KEDEPQLAKI TRDSAKITVE QVHGLMSQVI KDILFNSARQ SKKSADDSSD PEPMITS
Arabidopsis Description
CSN5ACOP9 signalosome complex subunit 5a [Source:UniProtKB/Swiss-Prot;Acc:Q8LAZ7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.